Panicum virgatum (switchgrass): 120692692
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Entry
120692692 CDS
T07260
Name
(RefSeq) protein argonaute 7-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120692692
03036 Chromosome and associated proteins [BR:
pvir03036
]
120692692
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
120692692
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
120692692
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
120692692
microRNA pathway
RISC loading complex
120692692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Piwi_N
Motif
Other DBs
NCBI-GeneID:
120692692
NCBI-ProteinID:
XP_039832001
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All DBs
Position
9N:58047285..58051900
Genome browser
AA seq
1035 aa
AA seq
DB search
MEGEAVAKNEGKLGGGGGGGGVNNGGGGGANGRRRWKGGGGRQHPIIQAYPALLPLPIHA
SHARRNGAVALPLPLPPPVLVYLHQPPPPLLFPKAAACYGKPNGVPPQRGPAWRSRKPPP
PPHAVTAALLPLPHDSELLQHKKCFIHEHRTSDVKANHVSTRQHSSMDMHGVTIAPRPDG
GGVKGNVIPLYANHFLVHFDPGKKIFHYDVDIYPHPSKETARMIKNKLVEENSSVLSGAL
PAFDGRKNLFSPIEFLQQNRLEFFVSLPAAASTRFIAAKESAHMLDKQNHKVFRVNLRLV
SKLSGEELNKYLKEEKDGIPLPQDYLHALDVILREGAMENSIPIGRSLYSNSMGEAKEIG
GGAVVLRGFFQSLRPTKQGLSLNVDLSLTAFHENIGIIAYLQKRCDFMKDLSQMKTRALA
ENERREIEKALKNIRVFVCHRETDQRYHVHGLTDETTENLKFQDRSGKDYTVVDYFMEHY
NHDIKFRKLPCLQIGKSKPCYVPMELCMVCEGQKFLGKLSDEQTSKMLKMGCQRPSERKG
IIKGVVEGTFAARSNSYADQFSLKVSKDMTQLSGRVLLPPKLKLGNGGRIKDITPDRFDR
QWNLMDSHVAEGSKIKSWALISFGGSPEHQSFVPKFINQLSSRCEQLGILLNKKTVVSPL
FERIQLLNNVGILESKLKKIQEAALGNLQLLICIMERRHRGYADLKRIAETSIGVVTQCC
LYSNLTKLSFQFLANLALKINAKLGGCNIALYNSLPCQIPRIFSDKEPVMFMGADVTHPH
PLDDSSPSVVAVVASMNWPSSNKYISRMRSQTHRKEIIEQLDVMAGELLEEFVKEVGKLP
SRIIFFRDGVSETQFYKVLTEELQAVRLTCSRYPGYKPSITFVVVQKRHHTRLFHREKNG
VSTHYSDQNVPPGTVVDTVITHPREFDFYLCSHWGTKGTSRPTHYRVLWDENNFKSDEMQ
QLIHNLCYTFARCTKPVSLVPPAYYAHLAAYRGRLYLERSDSSDTSRTTLYRATPLQTAP
LPKLRDSVKGLMFYC
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggagggggaggcggtggccaagaacgaggggaagctgggaggcggcggcggcggagga
ggggttaacaatggcggcggcggcggcgcgaacgggaggaggaggtggaagggcggcggc
ggcaggcagcacccgatcatccaggcctacccggcgctcctgccgctgccgatacacgcc
tcccacgcgcgtcgcaacggcgccgtcgcgctgccgctgccgctgcccccgcccgtgctg
gtctacctgcaccagccgccgccgccgctgctgttccccaaagcggcggcgtgctacggg
aagcccaacggcgttccgccgcagagggggcccgcatggagatcgaggaagccgccgccg
ccgccgcacgccgtcaccgccgcgctgctgccgcttccgcacgatagcgagctccttcag
cacaaaaagtgtttcattcatgagcaccgaacatctgacgtgaaagcaaatcatgtgagc
acccgtcagcattcatctatggacatgcatggagtcaccattgcacccagacctgacggg
ggtggagttaagggaaatgtaattcctctctatgcaaaccatttccttgtgcattttgat
cctggaaagaagatttttcattacgatgttgacatatacccacacccttcgaaagaaaca
gcaagaatgatcaagaacaagctagttgaagaaaattcaagtgtcctctcaggggccctt
ccagcctttgatggccgcaagaatctgtttagtccaattgagtttcttcaacagaacagg
cttgagttctttgttagtcttccagcagctgcatcaacacgatttatagcagctaaagag
agtgcccacatgcttgacaagcagaatcataaggttttcagggtgaaccttcggttggtt
tcaaagctaagtggtgaggagttgaacaagtacttgaaagaagagaaggatggtattcct
cttcctcaagattaccttcatgcattggatgtcatcctgcgggaaggtgctatggaaaat
tctattcccataggtcggtctttgtattcaaattccatgggagaagcaaaggagattggt
ggtggggctgttgtattacgaggttttttccagagcttgaggccgacaaagcaaggtctt
tccctcaatgttgacctctcccttacagcattccacgaaaacattggcataattgcatac
ttacagaagcgctgtgacttcatgaaggacctttcacagatgaagactagggctttggca
gaaaatgagaggagggagatagagaaagcattgaagaatattcgagtttttgtgtgccac
cgtgaaactgaccaaaggtaccatgtgcatggcttgactgatgagacaacagagaacctc
aagtttcaagatcgcagtgggaaggattatacggtagtggattacttcatggagcactac
aaccatgatatcaaattcaggaagcttccctgcttgcaaattggtaagagcaagccgtgc
tatgtgccaatggagctttgcatggtttgtgagggccagaaatttcttggcaaactctca
gatgaacagacctccaagatgctcaagatgggttgccagagacccagtgaaagaaaggga
attataaagggtgttgttgaaggaacatttgctgctagaagcaattcatatgctgatcaa
ttcagcctgaaagtgtccaaggacatgacacagctctcagggagagttctcttgccacca
aaactgaagctcggtaatggagggcgcatcaaggatataacaccagacagatttgatcgg
caatggaatttgatggacagccatgttgctgagggttccaagatcaagagctgggcgttg
ataagctttggtggcagcccagagcatcaatcatttgttccaaagtttatcaaccagcta
tcaagccgatgcgagcaactcgggattctactcaacaagaaaactgttgttagccctttg
tttgagcggattcaactgctgaacaatgttggcattttggagagcaagctgaagaaaatt
caggaagccgccttgggcaatttacagttgctaatctgtatcatggagcggaggcatcgg
ggctacgctgatttgaagcgcattgcagaaacatccattggtgtcgtgacacagtgttgc
ctgtactccaacttaaccaagctgagctttcagttcttggccaatctagcactgaagata
aatgcaaagctcggtggctgcaatattgccctctacaacagcttgccctgccaaattcct
agaatattttcggacaaggagccagtgatgttcatgggtgctgatgtgactcacccacat
cccctagatgactcgagtccatcagtggttgccgtagttgcaagcatgaattggccttca
tcaaataagtacatctccaggatgaggtcgcagacgcaccgcaaagaaatcattgagcaa
ctcgatgtgatggctggtgaactgcttgaggagttcgtgaaagaagtcggtaagctccca
agtagaatcatattcttcagagacggtgtgagtgagacacagttctacaaggtactgaca
gaggagttgcaggcagtgcgcttgacatgttcaagatacccaggctacaagccgtcgatc
acgttcgtcgttgttcagaaaaggcatcacacgaggctcttccacagggagaagaatggc
gtctccacacactactctgaccagaatgtgccaccggggacagtggtcgacaccgtgatc
acacacccaagggagttcgatttctacctgtgcagccattggggcacaaaggggacgagc
aggccgacgcactaccgagttctgtgggatgagaataacttcaagtccgacgagatgcag
cagctgatacacaatctttgctacacctttgcgcgctgcaccaagcctgtctctctcgtc
ccaccggcatactacgcccacctcgcggcatatagaggaaggctgtatcttgagagatcg
gactcatcggacaccagccggacaactctgtacagagccacgccattgcagacagcccca
ctccccaagctccgagatagtgtcaaggggctcatgttctactgctga
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integrated database retrieval system
