Panicum virgatum (switchgrass): 120692716
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Entry
120692716 CDS
T07260
Name
(RefSeq) E3 ubiquitin-protein ligase SPL2-like
KO
K15688
E3 ubiquitin-protein ligase MUL1 [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120692716
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120692716
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120692716
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDE
zf-C3HC4_3
Prok-RING_4
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
120692716
NCBI-ProteinID:
XP_039832032
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All DBs
Position
9N:complement(77172796..77175980)
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AA seq
371 aa
AA seq
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MSARDRETAEALVRLAASLDGAVLGLGTAAVAVASWVKYLAVSGQLRLVASAAASSISDL
HSLLPGSGGEPRLAAVRGYVRPKPGGTILRTPFSGEHGVVTKHTQMCLFTEWRGIFGWTF
DLHALLFRSWKEQIVTSFRTVPFVLASSEIGNPIGMVYINVEKADQPLPLTTVFHKLIPI
ETTPYTLFQTIIGNGYPIALLDEEKILPIGKELTAIGLCRAKDESVEISSCPDLPFFLSE
LTKDEMQAQLASRARTLFWGSIVLGTLSVCLMGRAIYRCWKRIKLRREARQAQQLFEDAE
DAIQEGDSSDEEVGDGQLCVVCLRRRRKAAFIPCGHLVCCCKCALRMEREAEPLCPMCRQ
DIRYMMRIYDS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgcgtgaccgcgagacggccgaggcgctggtgcggctcgccgcctcgctggac
ggggcggtgctcggcctcggcacggcggccgtcgcagtagcgtcatgggtcaagtacctc
gccgtctcggggcagctgcgcctcgtcgcctccgcggcggcgtcctccatctccgacctc
cactccctgctccctggcagcggcggagagccgcggctcgcggcggtgcggggctacgtg
cgccccaaaccggggggcacgatcctccgcaccccgttctccggggagcacggggtcgtc
accaagcacacccagatgtgcttgttcacggaatggagaggcatctttggatggaccttt
gatctgcatgctcttcttttcagatcatggaaggaacagattgtaacatcttttagaacg
gttccgtttgttcttgccagttctgagattggaaaccctattgggatggtttatatcaat
gtagagaaggcggatcaaccattacctcttacaactgtgtttcataaacttatcccaatt
gagacaactccttacacattgtttcaaactattattggcaatggctatcccattgcatta
ttggatgaagaaaaaatactaccaattggaaaggagcttacagcaataggactatgtcga
gcaaaggatgaaagtgttgagatcagctcatgcccagatctcccctttttcttatctgag
ctgaccaaggatgagatgcaagctcagctggcttcgcgtgctaggacactcttttggggt
agtattgttttgggaaccttgtctgtttgcctaatgggccgtgccatttacaggtgctgg
aagagaatcaaactgcggagagaggctaggcaagcacaacagttatttgaggatgctgaa
gatgctattcaagaaggtgactccagtgatgaagaagtaggggacgggcagctatgtgtt
gtgtgcttaaggaggagaaggaaagcagcttttattccttgtgggcatcttgtctgctgt
tgcaaatgtgcattaagaatggaacgtgaggctgaaccattgtgcccgatgtgtcggcag
gacatcagatacatgatgaggatttatgactcttga
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