Panicum virgatum (switchgrass): 120692744
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Entry
120692744 CDS
T07260
Name
(RefSeq) transcription factor MYB4-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120692744
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120692744
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
120692744
NCBI-ProteinID:
XP_039832062
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Position
9N:23582956..23585193
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AA seq
282 aa
AA seq
DB search
MGRAPCCEKEGLRRGAWSPEEDQRLVAYIRQHGHPNWRALPRQAGLLRCGKSCRLRWINY
LRPDIKRGNFSADEEALIVRLHRELGNRWSAIAAQLPGRTDNEIKNVWHTHIKKRLEGDP
EGGASAAGRPKQKARKSKPAAARNKKQAAAKADNSETFMTASPGLSSSVSSGVTTFAAAA
ESTAAVSSGDTAATTSASLQPEAAKAETEMEMEMESFSSAEFPPIDESFWSSPDVVDMGL
GAMDEELGLASPPSAATRDEDMEFWLKMLLESGDMRDLSVVL
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggggagggcgccgtgctgcgagaaggaggggctgcggcggggcgcgtggagccccgag
gaggaccagcggctggtggcctacatccggcagcacggccaccccaactggcgcgcgctg
ccgcggcaggcggggctgctccgctgcggcaagagctgccgcctccgctggatcaactac
ctccgcccggacatcaagcgcggcaacttctccgccgacgaggaggccctcatcgtccgc
ctccaccgcgagctcggcaacaggtggtccgcgatcgcggcgcagctgccggggcgcacc
gacaacgagatcaagaacgtgtggcacacccacatcaagaagcgtttggaaggcgacccg
gagggcggcgcctccgccgccggccggccgaagcagaaggcgcgcaagagcaagcccgcc
gcggccaggaacaagaagcaggccgccgcgaaggccgacaacagcgagacgttcatgacg
gcgtcgccggggctgtcgagtagcgtgagcagcggcgtcacgacgttcgccgcggcggcc
gagtccaccgcggcggtgtcgtcgggcgacaccgcggccaccacaagcgcgagcctccag
cccgaggccgccaaggcggagacggagatggagatggagatggagagcttcagctcggcg
gagttcccgcccatcgacgagagcttctggtcgtcgccggacgtggtggacatgggcctc
ggcgccatggacgaggagctgggcctcgcgagcccgccgtcggcggccacgagggacgag
gacatggagttctggctcaagatgctgctcgagtccggcgacatgagggacctcagcgtc
gtcttgtaa
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