Panicum virgatum (switchgrass): 120692747
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Entry
120692747 CDS
T07260
Name
(RefSeq) microtubule-associated protein RP/EB family member 1C-like
KO
K10436
microtubule-associated protein, RP/EB family
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120692747
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120692747
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
120692747
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
120692747
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EB1
CH
CH_2
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
120692747
NCBI-ProteinID:
XP_039832065
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Position
9N:21471006..21473423
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AA seq
371 aa
AA seq
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MPSSSLSSRPGPRAPPSSKYQIHPSSSRSPTPLHASTPLPIPRTSRAAAASNIGMMDGAY
FVGRNEILAWINTTLQLGLSKVEEAASGAVACQLMDAAHPGAVPMHKVNFDAKTEYDMIQ
NYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEFMQWMKRYCDSVSGGFMTSYNASERRE
SSKGGKETNRRTSVPSQTPAKSTSTGHKTQPSSHGAKRGSGQAANAPQRSAKPSPANSGG
PAYDEQITELKLLVDSLEKERDFYFSKLRDIEILCQSPEVEHVPVVHAIQNILYTSEDDP
ATVAEAQAMVSQLQQQPALSPILEASDERPKPEAANKRKSISDLEEFGMASSSRQRLSDI
SDVGSPLMSFS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgccctcctcttccctttcaagcaggcccgggccgcgggcgccgcccagttcgaaatat
caaatccatccatcctcctcacgttctcccaccccgctccacgcctccaccccactcccc
atcccccgaacctcgcgagcggcggcggcgagcaacatcggcatgatggacggcgcctac
ttcgtcgggcgcaacgagatcctcgcgtggatcaacaccacgctgcagctcggcctctcc
aaggtggaggaggcggcgtcgggcgcggttgcgtgccagctgatggacgcggcgcacccg
ggggcggtgccgatgcacaaggtcaacttcgacgccaagacagagtacgacatgatccag
aactacaaggtcctgcaggacgtgttcaacaaactcaagatcaccaagcacatagaggtg
aacaaactcatcaaaggaagacctcttgacaatttggagtttatgcagtggatgaaaaga
tactgtgattctgttagtggtggtttcatgaccagctacaatgcttctgagagaagggaa
agcagcaaaggtggaaaagaaaccaacagaagaacatcggtgccctctcaaacgccggcc
aagtctacatctacaggacacaagactcaaccttcatcacatggcgctaagcgggggagt
ggacaagcagcaaatgcgccacaacgcagtgctaaaccgtcaccagccaactctggcgga
ccagcttatgatgaacagatcaccgagctgaagctcctggtggatagcctcgagaaggag
agagatttctacttctccaagttgcgggacattgagatcctgtgccagagccctgaagtt
gagcacgtgccggtcgtccatgctatccagaacatactctacacatcagaggacgacccc
gcgacagtggccgaagctcaggcgatggtttcacagctgcagcaacagccggcgctgagc
cccatcctggaggcgtccgatgagaggccgaaaccagaggcagcgaacaagcggaagagc
atctcggacctggaggagtttgggatggcatccagctcacggcagaggctctccgacatc
tcggacgttggctccccgctgatgagtttcagctga
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