Panicum virgatum (switchgrass): 120692828
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Entry
120692828 CDS
T07260
Name
(RefSeq) putative GPI-anchor transamidase
KO
K05290
GPI-anchor transamidase subunit K
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
120692828
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Motif
Pfam:
Peptidase_C13
Motif
Other DBs
NCBI-GeneID:
120692828
NCBI-ProteinID:
XP_039832190
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Position
1K:complement(10634482..10638318)
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AA seq
403 aa
AA seq
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MASGARGPEPPRPPRAPTHLAPLLLLPALLLASSSPSPAAAAAMHNNNWAVLVCTSRFWF
NYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNPRNSYPAQVFNNENHQLNLYGDNV
EVDYRGYEVTVENFLRVLTGRHESAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEE
LQSHDLADAVKQMKEKHRFKELLIMVDTCQAATLFSQLHSPGVLAIGSSMKGENSYSHHL
DSDIGVSVVDRFTYYTLAFFEKLNMYSNASLNSLFNSYDRSMLMSTAYYRMDLYERPLNE
VPVTNFFGSVMKTLHTDSAYTGFLSAHDDETPMSIRDNQHDHFMSKNEARARRSNKEKEA
QIIPHGWTEVLLEQLEGKNTDTVVLYGLGTMGILLALSTWLSM
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggcgcccggggcccggagcccccgcggccccctcgcgcgcccacccacctc
gcgccgctgctgctgctgcccgcgctcctcctcgcctcctcctccccctcccccgccgcc
gccgccgcgatgcacaacaacaactgggccgtgctcgtatgcacctcccggttctggttt
aattatcgacatatggcgaatactctgtctttgtacaggactgttaagagattaggaata
cctgatgagcgaatcatacttatgttggcggatgatatggcttgcaatcctaggaacagt
tatcctgcccaagttttcaacaatgagaaccaccagctaaatctttatggtgacaatgtt
gaggttgattatcgagggtacgaggtcacagtggaaaactttttgagagttttgactggc
agacatgaaagtgcggtaccaagatcaaagcgtctcctaagtgatgaaggaagccatatt
cttctgtacatgactgggcatggaggtgatgagtttttgaagttccaagattctgaagag
cttcagagccatgacttagcagatgcagtgaagcagatgaaggagaaacatagatttaaa
gagctgctgataatggtagatacttgccaagctgctactctcttttcacagcttcattca
cctggtgttttggcgatcggtagcagcatgaagggtgaaaactcttattctcaccatctt
gattcagatattggtgtttctgttgttgataggtttacctattatacacttgctttcttt
gagaaactgaacatgtatagcaatgcctcattgaacagtcttttcaactcatatgatcgt
tccatgctgatgtctactgcatattatcgaatggatctttatgagcggcccttaaatgag
gtgcctgtgacaaatttctttggatcagtcatgaagactctccatacagattcagcctac
acaggtttcttgtctgcacatgacgatgaaactcccatgtccatcagagataaccaacat
gatcatttcatgtcaaagaatgaggctagagcaagaagatcaaacaaagaaaaggaggca
caaataataccccatggatggacagaagttctgcttgaacagctggagggcaagaatact
gacactgttgtgctgtatggtctgggaacaatgggtatattgttggcactttcaacctgg
ttatcaatgtag
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