Panicum virgatum (switchgrass): 120692843
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Entry
120692843 CDS
T07260
Name
(RefSeq) trans-cinnamate:CoA ligase, peroxisomal-like
KO
K23618
acyl-activating enzyme 11/12 [EC:
6.2.1.2
6.2.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pvir01004
]
120692843
Enzymes [BR:
pvir01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.2 medium-chain acyl-CoA ligase
120692843
Lipid biosynthesis proteins [BR:
pvir01004
]
Acyl-CoA ligase
Short/medium chain acyl-CoA ligase
120692843
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
120692843
NCBI-ProteinID:
XP_039832174
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All DBs
Position
9N:complement(80361960..80364191)
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AA seq
581 aa
AA seq
DB search
MDQLPKRPANYVPLSPVGFLPRANAVYGDRLSVVYGRVRFTWSQTYHRCRRLASALLALG
VRRGDVVSVLAPNVPAMYEMHFAVPMAGAVLNTINTRLDANAVATILRHSGAKFLFVDYE
YVRLAGDALQLLAGAGGSVPLVAVIDDADAPTGVRLGELEYEGLVARGDPDADLPPLADE
WDAVTLNYTSGTTSAPKGVVYSHRGAYLSTTSLLLQWGVGTEPVYLWTLPMFHCNGWTFT
WGMAARGGVNVCIRDARPADIYRAIARHRVTHMCCAPVVFSILLEGGASEQQLEAPVHVL
TGGAPPPAALLERVERIGFRVTHAYGLTEATGPALACEWRDQWDRLPLPERARLKARQGV
SVLSLADADVKDAGTLQSVPRDGKTVGEIVLRGSSVMKGYFNNPKANEEAFKGGWFLTGD
VGVVHQDGYIEIKDRAKDVIISGGENICSKEVEEVLFRHPAVADAAVVAMPHPRWGETPC
AFVVARDKAARVSEDDVLAFCSKRMSRFMVPKKVVVVEALPRNGLGKPEKVKLREVARKL
AHTVPAQKPKGKTTSTTTTVGGRRDEQPVAHIMAVSRSSRL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggaccagctccccaagcgccccgccaactacgtgccgctgagccccgtcggcttcctg
ccgcgcgccaatgccgtctacggcgaccgcctgtccgtcgtctacggccgcgtccgcttc
acctggagccagacgtaccaccgctgccgccgcctcgcgtccgcgctcctcgcgctcggc
gtccgccggggcgacgtcgtctccgtcctcgctccaaacgtgccggccatgtacgagatg
cacttcgccgtgcccatggccggcgccgtgctcaacaccatcaatacgcgcctcgacgcc
aacgccgtcgccaccatcctgcgccactccggggccaagttcctcttcgtcgactacgaa
tacgtgcgcctcgctggcgacgcgctccagctcctcgctggggccggcgggtccgtcccg
ctcgtcgccgtaatcgacgacgccgacgcgcccaccggcgtccggctcggcgagctcgag
tacgaggggctcgtcgcgcgcggagacccggacgccgacctgccgccgctcgcagacgag
tgggacgccgtcacgctcaactacacgtccggcaccacctccgcgcccaagggcgtcgtc
tacagccaccgcggcgcgtacctcagtaccaccagcctgctgctgcagtggggggtgggc
accgagcccgtctacctgtggacgctccccatgttccactgcaacggctggaccttcacg
tggggcatggcggcgcgcggcggcgtcaacgtctgcatccgcgacgcgcgccccgcggac
atctaccgcgccatcgcgcgccaccgcgtcacacacatgtgctgcgcgcccgtggtgttc
agcatcctccttgagggcggcgccagcgagcagcagctcgaggccccggtccacgtcctc
accggcggtgccccgccgccggccgcgctgctggagcgcgtcgagcggatcggcttccgc
gtcacgcacgcctacggcctcacggaggcgacggggcccgcgctcgcatgcgagtggcgc
gaccagtgggaccgcctgccgctcccggagcgcgcgcgcctcaaggcgcgccagggggtc
agcgtcctctccctcgccgacgccgacgtcaaggacgccggcaccttgcagagcgtgccg
cgcgacgggaaaaccgtcggggagatcgtcctccgcggcagcagcgtcatgaaggggtac
ttcaacaaccccaaggccaacgaggaggccttcaagggcggctggttcctgacgggcgac
gtcggcgtcgtgcaccaggacgggtacatcgagatcaaggacagggccaaggacgtgatc
ataagcggcggcgagaacatctgcagcaaggaggtggaggaggtgctgttccggcacccc
gccgtggcggacgcggcggtggtggcgatgccgcacccgcgctggggcgagacgccgtgc
gcgttcgtcgtggccagggacaaggccgcccgcgtctccgaggacgacgtgctcgccttc
tgcagcaagcgcatgtcgcgcttcatggtgccgaagaaggtggtggtcgtcgaagcccta
ccgagaaatggactgggcaagcccgagaaggtcaagctccgggaggtggcacgtaaactg
gcgcacacagtgccggcacagaagccgaaggggaagacgacgtcgacaacgacgacggtc
ggggggcgccgcgacgagcagccagtggcgcacatcatggccgtgtcaaggtcttcaagg
ctatag
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