Panicum virgatum (switchgrass): 120692954
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Entry
120692954 CDS
T07260
Name
(RefSeq) cation/calcium exchanger 1-like
KO
K13754
solute carrier family 24 (sodium/potassium/calcium exchanger), member 6
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120692954
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
120692954
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Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
120692954
NCBI-ProteinID:
XP_039832278
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Position
9N:complement(14635178..14637819)
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AA seq
580 aa
AA seq
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MALSRGRARTAPAAVPSACFLLLLVLLLTSSSLPAAPGRDGDSSTSTSTGPVLRFTTSSS
SSGKGQGDDCAELQSIDGGAARCAYLRAHSPCSPAGYVDYLRLFYCGFAGAPPAACAALA
LWLAVLFYLLGDTASEYFCASLEGLSAALRLPPAVAGVTLLSLGNGAPDVFASVVSFAAG
DGGGVGLSSALGGALFVSTVVAGAVALAVGARGGVVVEWRGFVRDLCFLLLALCYLLAVL
VNGAVTVWVAVSFVSLYVGYVVIVWTSHCCAEQGKPPAAGLAAPLLLDEDYGDDVPSLPS
HSKTGSAASGAASRGRAWLHCIARALCMPLYLPRRLTIPDIAAHRWSRPYAVASAALAPV
LLAFTWISQRHHLVSSSHRHSLPVLLGGAIVGLLLAALAAATTDAGSPPRGRKRRVPWLA
AGFLMSVLWAYTLARELVALLVAMGYVVGIKPSVLGVTVLAWGDSLGDLVSNVAMAVHGG
PGGAQTAVSACYAGPLFNTVVGLGLSLALAAGAQHPAPFVVPADAAAYEAVGFLGAALAW
ALFVLPVRGMRIDRVYGVGLVAIYLCFFAVRVFETLGLWA
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctcccgcgggcgcgcgcgcactgcccccgccgccgtccccagcgcctgcttc
ctccttctcctcgtgctcctcctcacctcctcctccctccccgccgccccggggcgcgac
ggcgactcctccacctccacctccaccggcccggttctccgtttcaccacgtcgtcgtcg
tcctccgggaaggggcagggggacgactgcgcggagctgcagtccatcgacggcggggcg
gcccggtgcgcctacctccgcgcgcactccccctgctccccggcggggtacgtggactac
ctccgcctcttctattgcggcttcgccggcgcgccgccggcggcgtgcgccgcgctcgcg
ctgtggctagcggtgctcttctacctgctgggcgacaccgcgtccgagtacttctgcgcg
tcgctcgagggcctctccgcggcgctgcgcctgccccccgccgtcgcgggcgtcacgctg
ctctcgctcggcaacggcgcgcccgacgtgttcgccagcgtcgtctcgttcgccgcgggc
gacggcggcggggtcgggctcagcagcgcgctcggcggggcgctgttcgtgtccaccgtc
gtcgcgggcgccgtcgcgctcgccgtgggcgcgcgcggcggggtcgtcgtcgagtggcgc
ggcttcgtgcgcgacctctgcttcctcctcctcgcgctctgctacctgctcgccgtgctg
gtgaacggcgcggtcaccgtctgggtggccgtgtcgttcgtctcgctctacgtcggctac
gtcgtcatcgtctggacctcccactgctgcgccgagcagggcaagccgccggccgccggg
ctcgccgcgccgctcctcctcgatgaggactacggcgacgacgtcccgtccctgccgtcc
cactccaagacagggtcggcggcatctggtgccgcgtcaaggggaagagcctggctgcat
tgcatcgcgcgcgcgctctgcatgcctctgtacctcccgcgccgcctcaccatcccggac
atcgccgcgcaccgctggtcccgcccctacgccgtcgcctccgccgcgctggcgccggtc
ctcctcgccttcacctggatctcgcagcgccaccacctggtgtcctcctcgcaccggcac
agcctcccggtgctcctcggcggcgccatcgtcggcctcctgctcgcggcgctcgccgcg
gccaccacggacgccggctcccctccccgcggccgcaagcgccgcgtgccgtggctcgcc
gcggggttcctgatgagcgtgctgtgggcctacaccctggcgcgcgagctcgtggcgctc
ctggtggccatggggtacgtggtgggcatcaagccgagcgtgctgggcgtgacggtgctg
gcgtggggcgactccctgggcgacctggtgtcgaacgtggcgatggcggtgcacggcggc
cccggtggcgcgcagacggcggtgtcggcgtgctacgcgggcccgctgttcaacacggtg
gtggggctgggcctgtcgctggcgctggcggcgggcgcgcagcacccggcgccgttcgtg
gtgcccgcggacgcggcggcgtacgaggcggtggggttcctgggcgcggcgctggcgtgg
gcgctgttcgtgttgcccgtccgcgggatgcgcatcgaccgcgtctacggcgtcgggctc
gtcgccatctacctctgcttcttcgccgtgcgcgtcttcgagacgctggggctctgggcc
tag
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