Panicum virgatum (switchgrass): 120692986
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Entry
120692986 CDS
T07260
Name
(RefSeq) scarecrow-like protein 21
KO
K27748
scarecrow-like transcription factor PAT
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120692986
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
GRAS
120692986
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAS
Inhibitor_I10
C2H2-2nd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
120692986
NCBI-ProteinID:
XP_039832325
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All DBs
Position
9N:complement(75895909..75901216)
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AA seq
536 aa
AA seq
DB search
MSTQASNRSYGYPDNTQIPYYDGNLVPVGGNGTYYMPKNHDDGHHISSDDGLQTSNSRAQ
GFQAQYCTLDSSSANCVYPAHSSTSSQSQSGSPQSQQESHSDHAYGSSPSASCVTHVPSW
TLKDLENVMLGPDSDIGSPDSSLLSGTALHENNWRELLGIKTGDLRQVIIACGKAVDENA
WYMDALMSELRQMVSVSGEPMQRLGAYMLEGLIARLSFTGHALYKSLKCKEPVATSSELM
SYMHLLYDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQWMTMIQALASRPGR
RPFLRITGIDDSNSAHARGGGLDIVGQRLHSIAQSCGMPFEFNPVPAASHEVMYEHLCIR
PGEAIVVNFAYQLHHTPDESVGIENHRDRILRMVKSLSPRVVTLVEQEANTNTAPFFLRY
LETLDYYTAMFEAIDVARPRDDKKRISAEQHCVARDIVNLVACEGAERIERHEPFGKWRA
RLAMAGFRPYPLSPVVNSTIKTLLDSYHSYYRLEEKDGVLYLGWKNRKLVVSSAWC
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacacaagcctctaaccggtcgtacggatatccggacaatacccaaataccatac
tacgatggcaatctagtgccagttgggggcaatggtacttactatatgccaaaaaatcat
gatgatggtcaccacatttcctctgatgatggattgcagaccagtaattctagagctcaa
ggttttcaagcacagtactgcaccctagactcatcctcagcaaattgtgtttatcctgca
catagctctacctcttctcagagccaaagcgggagtccccagtctcagcaggagagccac
tcagatcatgcatatggttcctctccaagtgcatcatgtgttactcacgttcccagttgg
acacttaaggatctagaaaatgtaatgcttggacctgattctgacataggcagccctgac
agctccttactatctggcactgctttgcatgaaaacaactggagagaacttttgggaatt
aaaaccggggatttgaggcaggtaattatagcatgtggtaaggctgttgatgagaatgct
tggtatatggacgcactgatgtctgagttaaggcaaatggtttctgtgtctggtgaaccg
atgcaacgactgggagcttatatgttggaaggtctcattgcgaggctttctttcactgga
catgccctatataaatctctgaagtgcaaagaacctgtggctacgagttctgagctcatg
tcctatatgcatcttctttacgacatctgtccattctttaagtttggttacatgtctgcc
aatggtgccatagctgaagctgttaagggtgaaaactttattcacatcatcgatttccaa
atcgctcaggggagtcagtggatgactatgattcaggcccttgcttcaaggcctgggaga
cgaccgttcctaagaatcactggcatagatgactcaaattctgctcatgcccgaggtggt
ggattggatatagttggacagaggttgcacagcattgcccagtcatgtggtatgcccttt
gagttcaatcctgttccagcagctagtcatgaagttatgtatgaacatctttgtataaga
cctggggaggcaattgttgtcaattttgcttatcagctgcatcatactcctgatgagagc
gtgggcatagaaaaccatcgtgataggatattaagaatggtcaagagcctctctccaagg
gtggtgactcttgtagagcaggaggcaaatacgaacacggcacctttctttcttagatac
ctggagactcttgattattacacagcgatgtttgaggcaatagacgttgctcgccccaga
gatgataagaagcgcatcagcgctgagcagcactgtgttgcaagagatattgtcaattta
gttgcttgcgaaggtgcagaaagaatagagaggcatgaacctttcggaaaatggagggca
aggcttgccatggctggatttagaccatacccattaagtccagtggtgaacagtaccatc
aaaacactgctggatagttaccacagctattacaggcttgaggagaaggatggtgtcctt
tatcttggctggaagaacagaaagctggttgtatcttctgcctggtgctga
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