Panicum virgatum (switchgrass): 120692991
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Entry
120692991 CDS
T07260
Name
(RefSeq) putative vesicle-associated membrane protein 726
KO
K08515
vesicle-associated membrane protein 7
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120692991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120692991
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120692991
Membrane trafficking [BR:
pvir04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
120692991
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120692991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
RNA_pol_RpbG
SHE3
LMBR1
bCoV_NS7A
MCU
Motif
Other DBs
NCBI-GeneID:
120692991
NCBI-ProteinID:
XP_039832330
LinkDB
All DBs
Position
9N:complement(77937484..77939658)
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AA seq
221 aa
AA seq
DB search
MGQQRTLIYSFVARGTTVLADHAEVSGNFASVAAQCLQKLPSNNNRFNYNCDGHTFNYHI
HDGFTYCVVATESSGRQLPIGFIERVKEDFSKKYSGGKARTANANGLKREYGPKLKEHMR
YCDQHPEEIDKLAKVKAQVTEVKGVMMQNIEKVLDRGEKIELLVDKTEDLRSQAQDFRQQ
GTKIRRKMWWENMKMKLIVFGIVVALILLIVLTVCKDFNCW
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggggcagcagcgcacgctgatctacagcttcgtggcgcgaggcaccactgtgctagcg
gaccacgccgaggtctccggcaacttcgcctccgtcgccgcgcagtgcctgcagaagctc
ccttctaacaacaatcgcttcaactacaactgcgacgggcacactttcaactaccacatc
catgatggattcacatactgcgtcgttgctactgaatcatctggccgacagcttccaatt
ggcttcattgagagggtcaaggaagatttttccaagaaatatagcggagggaaagccaga
actgctaatgccaatggcctcaagcgagaatatgggcccaaacttaaggagcacatgagg
tactgcgaccagcaccctgaggagattgacaagcttgcaaaagtgaaggctcaagtcaca
gaggtcaagggagtgatgatgcaaaacatcgaaaaggtgctagatcgtggtgagaaaatt
gaacttctcgttgataaaacggaggatctacgatcgcaggcacaagacttcaggcaacag
ggaacaaagatacggcggaagatgtggtgggagaatatgaagatgaagctcatcgttttt
ggcatcgtggttgccctgatcctcctcattgtcttgacagtctgcaaggacttcaattgc
tggtga
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