Panicum virgatum (switchgrass): 120692999
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Entry
120692999 CDS
T07260
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 9
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120692999
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvir04040
]
120692999
Ion channels [BR:
pvir04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
120692999
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Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
120692999
NCBI-ProteinID:
XP_039832338
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Position
9N:15222259..15224223
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AA seq
649 aa
AA seq
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MAAVFQEDLKNTSRRIFDPQDRMLVRLNRAFLISCIVAIAVDPMFFYLPMVTDEGNLCVG
IDRWLAIATAVVRSVVDLFFLVRIALQFRTAYIKPSSRVFGRGELVIDTAQIARRYLRRF
FAADVASVLPFPQVVIWSFLHRSRGTAVLDTKDRLLFIVFLQYIPRVVRIYPISSELKRS
SGAFAETAYAGAAYYLLWYLLASHIVGAFWYLLSIERVSDCWRDACNEFPGCNRIYMYCG
NDQQLGFLEWRTITRQVINETCEPQKDGRAPFNYGIYSSAVESSVLKSKDTASKLLFCLW
WGLANLSTLGQGLKTSIYTGEALFSIALAIFGLILMAMLIGNIQTYLQSLTVRLEEMRVK
QRDSEQWMHHRLLPPELRQRVRRYDQYKWLNTHGVDEEALVQNLPKDLRRDIKRHLCLGL
VRRVPLFANMDERLLDAICERLKPSLCTEHTYIIREGDPVDQMVFIIRGSLESITTDGGR
TGFYNRSLLEEGDFCGEELLTWALDPKAGVCLPSSTRTVRALSEVEAFALPADELKFVAG
QFRRMHSKAVQHTFRFYSHQWRTWAATYIQAAWRRHLKRKAAELRRREEDQLDDDEGRSS
IRTTILVSRFAANALRGVHRQRSRRAGAVSELLMPVPKPREPDFGRDDY
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgttccaggaggacctgaagaacacctcccggcgcatcttcgacccgcag
gaccggatgctggtgcggctgaaccgcgcgttcctcatctcgtgcatcgtggccatcgcc
gtggaccccatgttcttctacctgccgatggtgaccgacgagggcaacctgtgcgtgggc
atcgaccggtggctggccatcgccaccgccgtggtgcgcagcgtggtggacctcttcttc
ctggtgcgcatcgcgctgcagttccgcaccgcctacatcaagccctcgtcgcgggtgttc
gggcgcggcgagctggtgatcgacacggcccagatcgcgcgccgctacctgcgccgcttc
ttcgccgcggacgtggcgtccgtgctcccgttcccgcaggtggtgatctggagcttcctg
caccgctccaggggcaccgccgtgctggacaccaaggaccggctgctcttcatcgtcttc
ctccagtacatcccgcgcgtggtgcgcatctaccccatctcctcggagctcaagcgcagc
agcggcgccttcgccgagaccgcctacgccggcgccgcctactacctgctctggtacctg
ctggccagccacatcgtcggcgccttctggtacctgctgtccatcgagcgcgtgagcgac
tgctggcgggacgcgtgcaacgagttccccggctgcaaccgcatctacatgtactgcggc
aacgaccagcagctggggttcctggagtggcgcaccatcacccggcaggtgatcaacgag
acctgcgagccccagaaggacgggcgcgcccccttcaactacggcatctactcgtcggcc
gtggagtcgagcgtgctcaagtccaaggacaccgcctccaagctgctcttctgcctctgg
tgggggctcgccaacctgagcacgctggggcaggggctcaagaccagcatctacaccggc
gaggcgctcttctccatcgcgctcgccatcttcggcctcatcctcatggccatgctcatc
ggcaacatccagacctacctccagtccctcaccgtgcgcctcgaggagatgcgcgtcaag
cagcgcgattcggagcagtggatgcaccaccgcctgctgccgccggagctgcgccagcgc
gtccgccgctacgaccagtacaagtggctcaacacgcacggcgtcgacgaggaggcgctc
gtccagaacctgcccaaggacctccgccgcgacatcaagcgccacctctgcctcggcctc
gtccgccgcgtcccgctcttcgccaacatggacgagcgcctcctcgacgccatctgcgag
cgcctcaagccctcgctctgcaccgagcacacctacatcatccgggagggcgaccccgtc
gaccagatggtcttcatcatccgcggcagcctcgagagcatcaccaccgacggcggccgc
accggcttctacaaccgcagcctgctcgaggagggggacttctgcggcgaggagctgctc
acctgggcgctcgaccccaaggccggcgtctgcctgccctcctccacgcgcaccgtcagg
gcgctctccgaggtcgaggccttcgcgctgcccgccgacgagctcaagttcgtggccggc
cagttccgccggatgcacagcaaggccgtgcagcacaccttccggttctactcgcaccag
tggcgcacctgggcggccacctacatccaggccgcctggcgccgccacctcaagcgcaag
gcggccgagctgcggcgcagggaggaggaccagctggacgacgacgagggcaggtccagc
atcaggaccaccatactggtgtcgcgcttcgccgccaacgcgctgcgcggcgtgcaccgg
cagcgctccaggcgggccggggccgtcagcgagctcctcatgccggtgcccaagccgcgg
gagcccgacttcggacgcgacgactactga
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