Panicum virgatum (switchgrass): 120693056
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Entry
120693056 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 33-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120693056
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120693056
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120693056
NCBI-ProteinID:
XP_039832389
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Position
9N:16261591..16265858
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AA seq
494 aa
AA seq
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MGKAVVSKSWQESKLLWHIAFPAILTAVFQFSIGFVTVGFVGHIGSVELAAVTVVENVIE
GFAYGALLGMGSALETLCGQAVGAGQVDMLGVYIQRSWIICGATALVLTPTYLFTGPILR
ALRQPGDIAAVAGTYCRWVVPQLFAYAANFPLQKFFQSQSRVWVVTFISGAGLAVHVALN
YVFVTRLGHGLLAAAIVGNVTWWLIILAQMGYLVSGCFPEAWRGFSMLAFKNLAAFVKLS
LASAVMLCLELWYYTAVLLLVGFLNNAQLQIDVMSICINYQLWTLMVALGFNAAVSVRVS
NELGANRPKAARFSVIMAVLTSGSIGAVFFAVFMAWRTGLPRFFSEDEDVLREAAKLGYL
LAGSIFLNSIQPVLSGVAIGAGWQALVAFVNIGSYYLVGIPLAALFGFKLKMDAMGIWVG
MTLGTLLQTAILLFISYRTKWDKQAMRAEERVREWGGRSDTLPSGTQVAPAIEDPDQLSN
GSGDLQLQPQHRTG
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggcggtggtgagcaagagctggcaggagtcgaagctgctgtggcacatcgcg
ttcccggccatcctgaccgccgtcttccagttctccatcggcttcgtcaccgtcggcttc
gtggggcacatcggctccgtcgagctcgccgccgtcaccgtcgtcgagaacgtcatcgag
ggcttcgcctacggcgccctgctcggcatgggcagcgcgctggagacgctgtgcgggcag
gcggtgggcgccggccaggtggacatgctgggcgtctacatccagcgctcctggatcatc
tgcggcgccaccgcgctggtcctcaccccgacgtacctcttcacgggccccatcctgcgc
gcgctccgccagcccggcgacatcgccgccgtcgccggcacctactgccgctgggtggtc
ccgcagctcttcgcctacgccgccaacttcccgctgcagaagttcttccagtcgcagagc
cgggtgtgggtcgtcaccttcatctccggcgccgggctcgccgtccacgtcgcgctcaac
tacgtcttcgtcacgcgcctgggccacggcctcctcgccgccgccatcgtcgggaacgtc
acctggtggctcatcatcctcgcgcagatggggtacctcgtctccggctgcttcccggag
gcgtggcggggcttctccatgctcgcgttcaagaacctcgccgccttcgtcaagctgtcg
ctcgcgtccgccgtcatgctatgcttagagctctggtactacactgcggtgctcctcctt
gtgggtttcctgaacaacgcgcaacttcagattgacgtcatgtccatttgcatcaattac
cagctctggaccctgatggttgcactgggatttaacgcagcagtcagcgtgagggtgtcg
aacgagctgggcgcgaaccggcccaaggcggccaggttctcggtgatcatggcggtgctg
acatcggggtccatcggcgccgtcttcttcgccgtgttcatggcctggaggaccgggctg
ccacgcttcttcagcgaggacgaggacgtgctgagggaggccgccaagctgggctacctc
ctcgccggctccatcttcctcaacagcatccagcccgtgctctcgggcgtggcgatcggg
gcagggtggcaggcgctcgtggcgttcgtcaacatcggcagctactacctcgtcggcatc
ccgctggctgccctcttcgggttcaagctcaagatggatgcaatggggatttgggtaggc
atgacactgggcactctgctccagacggccatactcctcttcatttcctacagaaccaag
tgggataaacaggcaatgcgggccgaggagagggtaagggagtggggaggaaggagcgac
accctgccgtcggggacgcaggttgcgccggcgatcgaagacccggatcagttgtcaaat
ggatctggagatttgcagctgcaaccgcagcacagaacagggtag
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