Panicum virgatum (switchgrass): 120693109
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Entry
120693109 CDS
T07260
Name
(RefSeq) endoglucanase 10-like
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120693109
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
120693109
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GFIT
Motif
Pfam:
Glyco_hydro_9
Motif
Other DBs
NCBI-GeneID:
120693109
NCBI-ProteinID:
XP_039832446
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Position
9N:8749232..8752859
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AA seq
621 aa
AA seq
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MFGRDPWGGSLEISNADSATDDDRSRDLDRAALMRQLDETQQSWLLAGPGDQAGKKKKKY
VDLGCVVLDRKIFMWTVGTILGLGVFIGFVMMIVKLVPHKRPPPPPPDQYTQALHKALMF
FNAQRSGPLPKHNGVSWRGNSCMKDGLSDSTVRRSLVGGFYDAGDAIKFNYPMAWSMTML
SWSVIEYKAKYEAIGELDHIKELIKWGTDYILKTFNSSADTIDRIVAQVGVGDTSKGSSQ
PNDHYCWMRPEDIDYKRPVTECHSCSDLASEMAAALAAASIVFKDSKTYSDKLVKGAKAL
YKFGRLTRGRYSPNGSDQAIFYNSTSYWDEFVWGGAWMYFATGNNSYLTIATAPGMAKHA
GAYWFGSPNYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPL
FNSFNFTKGGLIQLNHGGPQPLQYAVNAAFLASLYSDYLEAADTPGWYCGPNFYTTEVLR
KFARSQLDYILGKNPLKTSYVVGFGNKYPKRPHHRGASIPHNGVKYGCKGGFKWRETKKA
NPNILVGAMVAGPDRHDGFKDVRTNYNYTEPTLAANAGLVAALISIADIPTGRYSIDKNT
IFSAIPPMFPTPPPPPSAWKP
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgttcgggcgggacccgtggggcgggtcgctggagatctccaacgccgactcggcgacg
gacgacgaccggagccgggacctggaccgggcggcgctgatgcggcagctcgacgagacg
cagcagagctggctcctcgccggcccgggcgaccaggcgggcaagaagaagaagaagtac
gtcgacctcggctgcgtcgtcctcgaccgcaagatcttcatgtggaccgtcggcaccatc
ctcggcctcggcgtcttcatcggcttcgtcatgatgatcgtcaagctcgtaccgcacaag
cgcccgccgccgccgccgcccgaccagtacacgcaggcgctgcacaaggcgctcatgttc
ttcaacgcccagcgatctggtccgctgcccaagcacaacggcgtcagctggaggggcaat
tcctgcatgaaggatggtctctcggacagcaccgtccggcggagcttggtcgggggcttc
tacgatgcaggggacgccatcaagttcaactaccccatggcctggtccatgaccatgctc
agctggagtgtgatcgagtacaaggccaagtatgaggccatcggcgagctcgaccatatc
aaggagctgatcaagtggggtacagattacatcctcaagaccttcaattcgtcggccgac
acaatcgacaggattgttgcccaggtgggtgtaggtgacacctccaaaggcagctcccag
cctaatgaccactactgctggatgagaccagaggatatcgattacaaaaggcctgtcact
gagtgtcactcttgctcagatctagcatctgaaatggctgctgccctggctgcagcttcc
atagtgttcaaggacagcaagacctactctgacaagcttgtcaaaggtgcaaaagccctg
tacaaattcggcaggctgacgcgcgggcgatacagtccgaatggatccgaccaggcaatt
ttctacaattccaccagctactgggatgagtttgtgtggggtggtgcttggatgtatttt
gccacagggaacaattcatatctcacaatcgccacagccccgggaatggcaaagcatgct
ggagcctactggtttggcagtccaaactatggagtatttacctgggatgacaaacttcca
ggagctcaggttcttctcagcaggttgcgactcttcctaagtccagggtacccttacgaa
gaaatactgaggacattccacaaccaaactgacaacgttatgtgctcatatttaccttta
ttcaattcattcaacttcactaaaggaggattaatacaactcaaccatggagggcctcaa
ccacttcagtatgctgtcaatgcagctttccttgcttctttatatagtgactatcttgaa
gctgcagacacacctgggtggtactgtgggcctaatttttacaccacagaagtcctccgg
aagtttgccaggtcacagcttgattacatccttggaaagaacccactaaagacgagctat
gttgtgggttttggaaataagtaccctaagcgtcctcatcacagaggtgcatcgatacct
cataatggcgtcaagtatggatgcaaaggaggtttcaaatggagggagactaaaaaggca
aaccctaatattctcgtcggagcaatggtggctggccctgacaggcatgatggtttcaaa
gatgtccgcacaaactacaattacacagagcctactcttgcagcaaatgctggtttggtc
gcagcactgatttctatagctgatataccaactggaaggtacagcatcgataagaacaca
atcttctctgcaattcctcctatgttcccaacacctccaccgccgccatcagcatggaaa
ccataa
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