Panicum virgatum (switchgrass): 120693112
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Entry
120693112 CDS
T07260
Name
(RefSeq) syntaxin-related protein KNOLLE-like
KO
K08486
syntaxin 1B/2/3
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120693112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120693112
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120693112
Membrane trafficking [BR:
pvir04131
]
SNARE
Syntaxin (Qa)
Stx-PM
120693112
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
120693112
Exosomal proteins of other body fluids (saliva and urine)
120693112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
T2SSF
Se-cys_synth_N
NRD1_2
Motif
Other DBs
NCBI-GeneID:
120693112
NCBI-ProteinID:
XP_039832448
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All DBs
Position
9N:complement(8738781..8740136)
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AA seq
312 aa
AA seq
DB search
MNDLMTKSFMSYVDLKKAAMKDLEAGGDGIELPESGGVTDERLRGFFEEAEAVKAEMAAI
RDALDRLHAANEEGKSLHQADALRAHRGRVNADIVAVLRRARDIRARLESLDRANAAQRR
LSAGCREGTPLDRTRTAVTAGLRKKLKDLMLDFQALRQRMMSEYKETVERRYYTLTGEVP
EEEVIERIISDGRGEELLGAAVAEHGKGAVLAAVHEIQDRHDAAREVERSLLELHQVFLD
MAVMVETQGEKLDDIESHVANASHYVQGGNKELGKAKEYQRSSRKCLCIGIIILLLLVLL
VIVPIATSFRKS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacctcatgaccaaatccttcatgagctacgtcgacctgaagaaggcggcgatg
aaggacctggaggcggggggcgacgggatcgagctcccggagtcgggcggcgtcacggac
gagcgcctgcgcgggttcttcgaggaggcggaagcggtgaaggcggagatggcggcgatc
cgcgacgcgctcgaccggctccacgccgccaacgaggagggcaagtcgctgcaccaggcc
gacgccctccgcgcgcaccgtggccgcgtcaacgccgacatcgtcgccgtgctccgccgc
gcccgcgacatccgcgccaggctcgagtccctggaccgcgccaacgccgcgcagcggagg
ctctccgcggggtgccgcgagggcacgccgctggaccgcacgcgcaccgccgtcaccgcg
gggctccggaagaagctcaaggacctcatgctcgacttccaggcgctgcggcagcggatg
atgtccgagtacaaggagaccgtggagcgccgctactacacgctcaccggggaggtcccc
gaggaggaggtgatcgagcgcatcatctcagacggccgcggcgaggagctcctgggcgcc
gccgttgcggagcacggcaagggcgccgtgctcgccgcggtgcacgagatccaggaccgc
cacgacgcggcgcgcgaggtggagcgcagcctcctcgagctccaccaggtgttcctcgac
atggccgtcatggtggagacgcagggggagaagctcgacgacatcgagagccacgtcgcc
aacgcctcccactacgtgcagggcggcaacaaggagctgggcaaggccaaggagtaccag
cggagcagccgcaagtgcctctgcatcggcatcatcatcctgctgctcctcgtcctcctc
gtcatcgtgcccatcgccaccagcttcaggaagtcttga
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