Panicum virgatum (switchgrass): 120693140
Help
Entry
120693140 CDS
T07260
Name
(RefSeq) 3-ketoacyl-CoA synthase 1-like
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00062
Fatty acid elongation
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir04626
Plant-pathogen interaction
Module
pvir_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
120693140
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120693140
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
120693140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
Chal_sti_synt_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
120693140
NCBI-ProteinID:
XP_039832481
LinkDB
All DBs
Position
9N:43275750..43277775
Genome browser
AA seq
539 aa
AA seq
DB search
MEAAPSTAAVMERERLTAELDVVAEAAAEPMPSSFVVKIRRRLPDFARSVNLKYVRLGLR
SGGIPAPSSWVPLALAPPLLAAAAHSLVGADRLYSLDLLTCVAWLGAAVLLLTVYFLKRP
QPVYLVDFACYRPGDEHSISKEGFLEMTECTGRFNAEALEFQAKITTRSGLGDRTYLPPG
IQARPPRLSMAAARAEAEAVMFGCLDALFASTGIDPRRDVRVLVVNCSLFNPTPSLASMV
VHRYKMREDIKSFNLGGMGCSAGLIAVDLARDMLQANPGCYALVVSTENITLNWYFGNDR
SMLLSNCIFRMGGAAALLSNRRADAGRAKYRLLHTVRTHKGAADECYGCVYQREDGTGRV
GVSLARELMAVAGDALKTNITTLGPLVLPLSEQLKFLKSMVLRRVLRTRGVRPYIPDFRR
AFEHFCVHAGGRAVLEEVQRSLGLGDADMEPSRCTLHRFGNTSSSSLWYELAYAEAKGRV
RRGHRVWQIGFGSGFKCNSAVWRALRDVAPVPAGGGGGSSSNCNPWVDSIQSYPPKAYI
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgcgccgtcaacggccgcggtcatggagcgcgagcgcctcacggccgagctg
gacgtcgtcgccgaggccgcggcggagcccatgcccagcagcttcgtcgtcaagatccgc
cgccggctgccggacttcgcgcgcagcgtcaacctcaagtacgtccgcctcggcctgcgc
tccggcggcatccccgcgccctcgtcctgggtcccgctcgcgctcgcgccgccgctcctc
gccgcggcggcgcactcgctcgtcggcgcggataggctctactcgctcgacctactcacc
tgcgtcgcgtggctcggcgcggccgtgctgctgctcaccgtgtacttcctcaagcggccg
cagccggtgtacctcgtggacttcgcgtgctacaggcccggcgacgagcactccatctcc
aaggagggcttcctggagatgaccgagtgcacgggccgcttcaacgccgaggcgctcgag
ttccaggccaagatcaccacacgctccgggctcggcgaccggacgtacctcccgccgggg
atccaggcgcggccgccgcggctgtccatggccgcggcgcgcgcggaggccgaggccgtc
atgttcgggtgcctcgacgcgctgttcgcgtcgacggggatcgacccgcgccgcgacgtg
cgcgtgctcgtcgtcaactgcagcctcttcaacccgacgccgtcgctggcgtccatggtg
gtgcaccggtacaagatgcgcgaggacatcaagtcgttcaacctcggcggcatgggctgc
agcgcggggctcatcgccgtggacctcgccagggacatgctccaggcgaaccccgggtgc
tacgccctggtggtgagcaccgagaacatcaccctcaactggtacttcggcaacgaccgc
tccatgctgctgtccaactgcatcttccgcatgggcggcgccgccgcgctgctctccaac
cgccgcgccgacgccgggcgcgccaagtaccggctcctccacacggtgcgcacccacaag
ggcgctgcggacgagtgctacggctgcgtgtaccagcgcgaggacggcaccgggcgcgtc
ggcgtgtcgctggcgcgtgagcttatggccgtcgccggcgacgcgctcaagacgaacatc
acgaccctgggcccgctggtgctcccgctgtcggagcagctcaagttcctcaagtccatg
gtgctccgccgcgtgctccgcacccgcggcgtccgcccgtacatcccggacttccggcgc
gcgttcgagcacttctgcgtgcacgccggcgggcgcgccgtgctggaggaggtgcagcgc
agcctggggctcggggacgccgacatggagcccagcaggtgcaccctgcaccggttcggc
aacaccagcagcagctcgctctggtacgagctcgcctacgcggaggccaagggccgcgtc
cggcgcggccaccgcgtgtggcagattggtttcggctccgggttcaagtgtaacagcgcc
gtctggcgcgcgctccgcgatgtggcgcccgtgcccgccggcggcggcggcggcagcagc
agcaactgcaacccgtgggtggacagcattcagagctacccgccgaaagcgtacatctaa
DBGET
integrated database retrieval system