Panicum virgatum (switchgrass): 120693162
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Entry
120693162 CDS
T07260
Name
(RefSeq) protein SHORT-ROOT 1-like
KO
K27743
protein SHORT-ROOT
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120693162
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
GRAS
120693162
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Gene cluster
GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
120693162
NCBI-ProteinID:
XP_039832511
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Position
2K:62510427..62513426
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AA seq
594 aa
AA seq
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MDTLFRLVSLQASEQQQQQSASYNSRSTTSSGSRSSSHQTNASYNYYNHSNSGGSGGQYY
YGQQQQHQHQHQHQRYYLEPYQHEECGNAHHLYMDEDFSSSSSSRQHLHSHGAAVQPPTS
SVATAPTPPLSTSSTAAGAAHALFEAADLSFPPDLNLDFSSPASPSGGGAASSAAVGGGA
GGGRWASQLLLECARAVAARDSQRVQQLMWMLNELASPYGDVEQKLANYFLQGLFARLTA
SGPRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEAAAASPE
PQRFHILDLSNTFCTQWPTLLEALATRSADDTPHLSITTVVSAAPSAPTAAVQRVMREIG
QRMEKFARLMGVPFSFRAVHHAGDLAELDLDALDLRDGGATTAVAVNCVNSLRGVVPAGG
ARRRDAFTSSLRRLDPRVVTVVEEEADLVASDPDASDEAGGDTDAAFLKVFGEGLRFFSA
YMDSLEESFPKTSNERLALERAAGRAIVDLVSCPSSESMERRETAASWARRMRSAGFSPV
AFSEDVADDVRSLLRRYREGWSMRDACLDDSAAGAGVFLAWKEQPLVWASAWRP
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggatacgctgtttaggttggttagcctccaagcctccgagcagcagcagcagcagtcg
gcgtcctacaactcgaggagcaccacgtcgagcggctccaggtcgtcgtcgcaccagacc
aacgcctcctacaactactacaaccacagcaacagcggcggcagcggcggccagtactac
tacggccagcagcagcagcaccagcaccagcaccagcaccagcggtactacctggagccg
taccagcacgaagaatgcggcaacgcccaccacctttacatggatgaagacttctcatcg
tcgtcctcgtcgaggcagcacctccactcgcacggcgcggcggtacagccgccgacgtcg
tccgtggccacggcgccgacgcccccgctgtccacgtcgtccacggccgcgggggcggcg
cacgcgctgttcgaggcggcggacctgtcgttcccgcccgacctcaacctcgacttctcg
tccccggcgtcgccctccggcgggggcgctgcgtcgtcggcggcggtcgggggaggtgcc
ggcggcgggaggtgggcgagccagctgctgctggaatgcgcccgggcggtggcggcgcgg
gacagccagcgcgtgcagcagctcatgtggatgctcaacgagctggcgtcgccgtacggg
gacgtcgagcagaagctggccaactactttctccaggggctcttcgcgcggctcacggcg
tccgggccgcggacgctgcgcaccctcgcggcggcgtccgaccggaacacgtccttcgac
tccacgcgccgcacggcgctgcggttccaggagctcagcccgtggtcgtccttcggccac
gtggccgccaacggcgccatcctggagtccttcctggaggccgccgcggcgtcgccggag
ccgcagcgcttccacatcctcgacctcagcaacaccttctgcacgcagtggccgacgctg
ctcgaggcgctcgccacgcgctccgccgacgacacgccgcacctgtccatcaccaccgtg
gtgtcggccgcaccgtccgcgccgacggccgccgtgcagcgcgtgatgcgggagatcggc
cagcggatggagaagtttgcgcgcctgatgggcgtgccgttcagcttccgcgccgtgcac
cacgccggggacctcgcggagctcgacctcgacgcgctcgacctgcgcgacggcggcgcc
accaccgcggtcgccgtcaactgcgtcaactcgctgcgcggcgtggtgccggccggcggt
gcccgccggagagacgcgttcacctcgtccctccggcgcctcgacccgcgggtcgtcacc
gtcgtcgaggaggaggccgatctcgtggcttccgaccctgacgcgtccgatgaagcaggc
ggcgacacggatgcggccttcttgaaggtgttcggcgagggcttgcggttcttctcggct
tacatggactctctcgaggagagcttccccaagactagcaacgagaggctggcattggag
agggcagccgggcgtgccatcgtggacctggtctcgtgcccgtcgtcggagtccatggag
cggcgggagacggcggcgtcatgggcgcgccgcatgcggtcggccgggttctctccggtg
gcattcagcgaggacgtcgccgacgacgtgcggtcactgctccgccggtaccgggagggt
tggtccatgcgggacgcctgtttagacgactcggcagccggagcaggcgtcttcctcgcg
tggaaggagcagcctctcgtgtgggcaagcgcgtggaggccatga
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