Panicum virgatum (switchgrass): 120693207
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Entry
120693207 CDS
T07260
Name
(RefSeq) conserved oligomeric Golgi complex subunit 6-like
KO
K20293
conserved oligomeric Golgi complex subunit 6
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120693207
Membrane trafficking [BR:
pvir04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
120693207
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
COG6_C
COG6_N
ABC_tran_CTD
Motif
Other DBs
NCBI-GeneID:
120693207
NCBI-ProteinID:
XP_039832558
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All DBs
Position
9N:complement(73463532..73474505)
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AA seq
686 aa
AA seq
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MAAALAPGVSRKLKKVLETRTDSPDLLASLGALSTFYVQNTPQARRNLKSSIEQRSLSIN
RHFLDASLPAQKALDRVEGEVHALNDSWKKIEEALSSCSASTGDIISTTERMQQELEVIT
QQQEIVSCFLRDYQLSNEEIIALREEEIDEKFFKALLHVQEIHSNCKVLLRTHHQRAGLE
LMDMMSVYQEGAYERLCRWVQAECKKLGDTDNPEVSDLLKKAVRCLKERPVLFKYCAEEV
ANMRHHALFRRFISALTRGGPGGLPRPIEVHAHDPLRYVGEMLGWLHQALASERELIVVL
LDPDAMTDSGPASRRQSVKDGDSSRGEHDVTFVLDRIFEGACRPFKVRVEQVLQSQPSLI
VSFKLSNTLEFYGYTIAELLGEDTALCNTIWSLRDAAQQTFFNILKSRGEKLLRYPPLVA
VDLSPPPAVREGISLLLELIDTYNSMMVPASGKRPNFDPVISALLDPIIQMCEQAADAQK
SKGSLARRGRTSSDPSGNSRDSISVDAILSKNLSTSVLSAESLSKVYLINCLSAIQEPLM
GQEVATSYVNNLRSMIEAHIRALVDKEVDGILRKCGLSNKMPYIKDYDNNDDARPLADVA
ETSPQMLLECLKAFYGIVTGTEGSLPEFEQLQVPRLRSDACYGLARVLAETYELIYRAVM
DPKNDYPDPRSLVKHSPEQIRTILEI
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgctggctccgggggtgtcccggaagctgaagaaggtgctggagacgcgg
acggacagcccggatctgctggcatcgctgggcgcgctctccaccttctacgtgcagaac
accccgcaggctcgccgcaacctcaagtcctccattgagcagcgctcgctctccatcaac
cgccacttcctcgacgcctcgcttcccgcccagaaggcgctcgatcgtgtcgagggggag
gtgcacgcgctgaacgactcctggaaaaagattgaggaagcattgagcagttgcagtgca
agtactggggatatcattagtacaacagagaggatgcaacaggaacttgaagttattact
caacagcaagaaattgtgtcatgtttcctgcgggattaccaactatcaaatgaagagata
attgcactccgtgaggaagagatcgatgagaaattcttcaaggcattgctgcatgttcaa
gaaatacactcaaactgcaaagtcctgctgcgaacacaccaccagcgtgctggtttggag
cttatggatatgatgtctgtgtaccaagagggtgcttatgaaaggttatgcaggtgggtt
caagctgagtgtaaaaagttaggtgatactgacaatcctgaagtaagtgaccttttgaaa
aaggctgttcgctgcctgaaggaaagacctgttctattcaagtattgtgcagaggaggtg
gccaacatgagacaccatgccttattcaggcggtttataagtgctcttactagaggtgga
cctggagggctcccaagacctatagaagtgcatgcccatgatcctcttcgttatgtaggc
gaaatgctgggttggctacatcaggccctggcatcagaaagagagcttatagtcgtcttg
cttgatcctgatgcaatgactgacagtggtccagcttctcgacgtcagtctgtaaaagat
ggtgattcctccagaggagagcatgatgtaacttttgtgcttgatagaatatttgaaggg
gcatgtcggccatttaaagttcgagttgagcaagttttgcagtcacaaccaagcctgata
gtttctttcaaacttagcaataccttggaattctatggctacacgatagcagaacttctg
ggcgaagacactgcactgtgcaatacaatatggtctcttagagatgcagcgcagcagaca
ttcttcaatatcctgaagagtcgaggagagaagttattgcgatatcctccacttgttgca
gtcgacctctcccccccaccagctgtaagagaaggaatatctttgctgcttgagctcatt
gatacctacaatagcatgatggttcctgcctctggaaaaaggccaaactttgatccagtt
atttctgcattactggatcctataattcagatgtgtgagcaagctgcagatgcgcaaaag
tcaaaaggttcacttgctcggcgtggtagaacaagctctgatcctagtggaaatagcaga
gattcaatatcagttgatgctattctgtctaagaacttatctacatcggttctgagtgct
gaatctttgtccaaagtctacctcatcaactgcttatcagctattcaggaaccattgatg
ggccaggaggttgctacaagctatgtaaacaacctgcgttctatgattgaagcgcacatt
cgtgcccttgtagataaagaagttgacggcattcttaggaaatgtggactgtcaaataag
atgccatacataaaggactatgataacaatgatgatgcaaggcctctggctgatgttgcc
gagacgtctccgcaaatgcttctggaatgcttgaaggcattctatggcattgtgactgga
acagaaggttccttgcctgaatttgagcaactgcaggttccaaggttacgttcagatgcc
tgctatggtttggcaagagttctagcagaaacatatgagctcatttatagggcagtgatg
gatccgaagaacgactatcctgacccaagatcattggttaagcactctcctgagcagata
agaactatattggaaatttga
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