Panicum virgatum (switchgrass): 120693244
Help
Entry
120693244 CDS
T07260
Name
(RefSeq) phosphatidylinositol-glycan biosynthesis class F protein-like
KO
K05287
GPI ethanolamine phosphate transferase 2/3 subunit F
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
120693244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIG-F
LiaI-LiaF-TM_PspC
Motif
Other DBs
NCBI-GeneID:
120693244
NCBI-ProteinID:
XP_039832588
LinkDB
All DBs
Position
9N:complement(80515900..80518433)
Genome browser
AA seq
218 aa
AA seq
DB search
MRASVTEISVFTAAAAHVLCFAGFAVAHSIAGRGALVSDPARALRLLVVCEAPVVIAVFS
YLRRDPKSCSFSKAAARGLIGLPVGAFLNAFGAIVLGAPVGIKYLMVTIYWSLLVSLFTF
VPAACVFGASKIDWQNVLSHSIYFTPTEVENYMISAPCHGAVLGAWLGAWPLPLDWERPW
QEWPICVTYGAVAGHLVGMAVSPVLIAVHKRRVRAKAD
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcctccgtcaccgaaatcagcgtcttcacggccgcggccgcgcatgtgctctgc
ttcgccggcttcgctgtcgcccactcaatcgctggccgcggagctctcgtctccgaccct
gcgcgcgccctccgtctcctcgtggtctgtgaagcgcccgtagtcatcgcagtgttcagc
tacctccggcgtgaccccaaaagctgctcgttttccaaggctgctgcaagaggattgatc
ggcttgcccgtgggagcattccttaatgcgtttggagcaattgttcttggtgcacctgtt
ggaatcaagtacttgatggttactatttattggtcacttctcgtgtccctgttcaccttt
gttcctgcagcatgtgtctttggagcatccaagattgattggcagaatgtgctttctcac
tccatttatttcacgccaactgaagttgagaactacatgatctctgcaccttgtcatgga
gctgtgctaggagcatggctgggtgcttggcctttgccccttgactgggagagaccttgg
caggaatggccaatctgtgtcacttatggggcagttgctgggcatttggttggaatggca
gtgtcacctgtcctaatagctgttcacaagagaagggtccgtgcaaaagctgactag
DBGET
integrated database retrieval system
