Panicum virgatum (switchgrass): 120693246
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Entry
120693246 CDS
T07260
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A-like
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00510
N-Glycan biosynthesis
pvir00513
Various types of N-glycan biosynthesis
pvir01100
Metabolic pathways
pvir04141
Protein processing in endoplasmic reticulum
Module
pvir_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
120693246
00513 Various types of N-glycan biosynthesis
120693246
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120693246
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Motif
Pfam:
Ribophorin_I
Nmad5
OmpH
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
120693246
NCBI-ProteinID:
XP_039832589
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Position
9N:80519593..80524304
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AA seq
616 aa
AA seq
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MATPPPPLRRATLLLAAVLVGALASTARADLVISRADRRVDLTSHIVRVLSSLKVENVGP
DPDSQVLLSSPNIQAKNLAAIRAFATEGKVKGPSTVLSIEVVQPSGAPPELTFFSALLPK
PLEKGKILHLDVLTVFTHSLQPFPEEINQAEAQLVVYQDSAHYLSPYPVKVQTLAIRLPG
GRVESYTRHPSAKLVDSELKYGSSEELPPFSYLPVIVHFENNNPFAVAKEVIREIEISHW
GNVQITEHYNIAHGGARLKGEFSRIDYQSRPYVRGVSSFRNLIARLPPRAHSIYYRDEIG
NISTSHLWSDSKKTQLEIEPRFPLFGGWQTTFTVGYGLPLQDFVFYSDGKRFLNITFGSP
IEEILIEKLIVKVVLPEGSKDIEVSAPFPTKQWQEVKYSHLDIVGRPVVVLEKPDVIPEH
NLYFQVYYKFNNISLLREPLMLITGFFLLFLACIVYMGTDMSISKSSPSYLAKLQWDEVQ
ATVQKIQGIFEQCLAVHDKLEASLRDLSRTGDIQSCKAARKAADAQFKELSKELKPLLTS
LQSSPQSYQIWPKVEDLIIKEREMQEKLMTRHSTVVDSFEKKLRGQHLENRIALQQQKIA
ALRQEVESLLEYISEI
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccgccgccgcctctccgccgcgccaccctcctcctcgccgccgtcctcgtc
ggcgccctcgcctccaccgcccgcgccgatctcgtcatctccagggcagataggagggtt
gatctgacttcgcatatcgttcgcgtcctctcttccctcaaggttgaaaatgttggacca
gaccctgactctcaagttttactatcttctcccaacatccaagcaaagaacttagcagct
ataagagcatttgccactgaaggaaaagtgaagggtccaagtactgttctgtcaattgaa
gttgttcagccttctggagctcccccagagctaactttcttttcagcattgttacccaaa
cctttggaaaagggaaagattctacacttggatgtcctgactgtattcacacactctctt
caaccattcccagaagaaatcaatcaagctgaagcacaacttgttgtctatcaggatagt
gctcattatttgtcaccttaccctgttaaggtacagacacttgctatcagattgcccgga
ggaagggttgaatcatacacaaggcatccaagtgcaaaacttgtggattcagaactgaaa
tatggatcgtctgaagaacttcccccgttttcctacttacctgtgatcgtgcactttgag
aacaacaatccttttgcagtcgcaaaggaagttataagggagattgagatatctcactgg
ggaaatgtacagattacggaacactacaacattgcccatggtggtgccagactcaagggt
gaattttccaggattgattatcagtccagaccttatgtaagaggtgtttcatcttttagg
aatcttattgcaagactacctccaagggcccactctatttattacagagatgagattggt
aatatttcgacatcacatttgtggagtgactctaagaagacccaactggaaattgaacca
aggttcccactgtttggtgggtggcaaacaaccttcactgttggttatggtttaccactt
caagactttgttttctattctgatggaaagaggtttctcaatatcacttttggttctcca
attgaggaaattctcattgaaaagcttatagtaaaggttgtgctacccgaagggtcaaag
gatatcgaagtttcagctccctttccaacaaagcagtggcaagaggtgaagtattcacac
cttgacattgttggaaggccagttgttgtcttggagaagcctgatgttattccagagcat
aatttgtatttccaggtttactacaaattcaacaatatatccttgctccgagagccgttg
atgcttattactggtttcttccttctgtttctggcctgtattgtttacatgggcactgac
atgtcaatttccaagagctctccttcatacttggccaagctgcaatgggatgaggtgcaa
gccactgttcagaaaatccagggtatctttgagcaatgcttagcagttcatgataaactg
gaggcctcattgcgtgatttatctaggactggggacattcagtcttgcaaggctgctcgt
aaagctgctgatgcacagtttaaggagctatcgaaagagctgaagccattgttgacatct
ctacagtcatctccccagtcttatcagatatggccaaaggtagaggatttgatcataaag
gagagagagatgcaggagaagcttatgacaagacattccaccgttgttgacagctttgag
aagaagctgcgcgggcaacatttagagaacaggattgctttgcagcagcagaaaattgct
gccctgaggcaggaggttgaatctcttttagagtacattagtgagatttga
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