Panicum virgatum (switchgrass): 120693307
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Entry
120693307 CDS
T07260
Name
(RefSeq) myb-related protein Hv33-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120693307
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120693307
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120693307
NCBI-ProteinID:
XP_039832665
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Position
9N:62295308..62297256
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AA seq
284 aa
AA seq
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MNHIAKYGHGCWSSVPKLAGLERCGKSCRLRWINYLRPDLKRGTFSQEEEDLIIHLHSLL
GNKWSQIAAQLPGRTDNEVKNFWNSYIKKRLRERGIDPATHQPLAEPAAACRAVFGDVVD
LIPATASLQPLAEPMPLDGVKLPLDWPVAGAPAPPPSRSSCYLQGGCFDMDALQQHCGGG
AVPSASSSSTLTSMAEAEHCNNADVAGAGLPWLELGPNAVADAAGHVDSYAGALDELRWS
EYFDGAFQAAASQQGALQAAGQCVYSGKDDVAVHFDVHGLSNWC
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacattgccaagtacggccacggctgctggagctccgtcccgaagctcgcaggc
cttgagaggtgtggcaagagctgcaggctgaggtggataaactacctgaggccagacctc
aagcggggcacattctcgcaggaggaggaggacctcatcatacacctccactccttgctg
ggaaacaagtggtctcagattgcggcgcagctgcccggccggacggacaacgaggtcaag
aacttctggaactcgtacatcaagaagaggctcagggagcgcggcatcgacccggccacc
caccagccgctcgccgagcccgccgccgcctgccgcgcggtgttcggggacgtggtcgac
ctcatccccgcgacggcgtcgctccagccgctcgcggagccaatgccgctggacggcgtg
aagctgccgctggactggcccgtcgccggcgcccccgcgccgccgccgtcaaggtcgtcg
tgctacctgcaggggggctgcttcgatatggacgcgctgcagcagcactgcggcggcggc
gccgtcccgtcggcgtcgagctccagcacgctcacctcgatggcagaagccgagcactgc
aacaacgccgacgtcgctggcgccggcctcccgtggctggagctcgggccgaacgccgtg
gccgacgctgccggccacgtcgacagctacgccggggcgctggacgagctcaggtggtcg
gagtacttcgacggcgccttccaggccgccgcgagccagcaaggcgccctgcaggccgcg
gggcagtgcgtctacagcggcaaggacgacgtcgcggtgcacttcgacgtccatgggcta
agcaactggtgctga
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