KEGG   Panicum virgatum (switchgrass): 120693408
Entry
120693408         CDS       T07260                                 
Name
(RefSeq) histone acetyltransferase GCN5-like isoform X1
  KO
K06062  histone acetyltransferase [EC:2.3.1.48]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120693408
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvir03021]
    120693408
   03036 Chromosome and associated proteins [BR:pvir03036]
    120693408
Enzymes [BR:pvir01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.48  histone acetyltransferase
     120693408
Transcription machinery [BR:pvir03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     120693408
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Histone modification proteins
   HATs (histone acetyltransferases)
    120693408
   HAT complexes
    PCAF complex
     120693408
    STAGA complex
     120693408
    TFTC complex
     120693408
    SAGA complex
     120693408
    SLIK complex
     120693408
    ADA-HAT complex
     120693408
    HAT-A2 complex
     120693408
    ATAC complex
     120693408
SSDB
Motif
Pfam: Bromodomain Acetyltransf_1 Acetyltransf_7 Acetyltransf_10 FR47
Other DBs
NCBI-GeneID: 120693408
NCBI-ProteinID: XP_039832767
LinkDB
Position
9N:29501785..29507538
AA seq 515 aa
MDGLAAPSPSHSGATSGGGASHRKRKLPPSSLSDATADEDDDTTAPSSPSSAPSSPSRPS
SPSSSHSDDDDDDSLHTFTAARLDGAPGGGSASGRPPKPDSSSVSAAAAAAAVAAGAGPK
PEPGSTAAGDGKEDPKGLFTDNLQTSGAYSAREEGLKREEDSGRLKFLCYSNDGIDEHMI
WLVGLKNIFARQLPNMPKEYIVRLVMDRTHKSMMVIRNNIVVGGITYRPYASQRFGEIAF
CAITADEQVKGYGTRLMNHLKQHARDTDGLTHFLTYADNNAVGYFVKQGFTKEITLDKER
WQGYIKDYDGGILMECKIDPKLPYVDLATMIRRQRQAIDEKIRELSNCHIVYSGIDFQKK
EASIPRRLMKPEDIPGLREAGWTPDQWGHSKSRSAFSPDYNTYRQQLTNVMRILLKSMNE
HPDAWPFKDPVDSRDVPDYYDIIKDPIDLRTMSRRVESEQYYVTLEMFVADMKRMFNNAR
TYNSPDTIYYKCATRLENFFSGKIASQLAQASTKS
NT seq 1548 nt   +upstreamnt  +downstreamnt
atggacggcctcgcggcgccgtccccgtcccactccggtgccacctccggcggcggggcc
tcccaccgcaagcggaagctcccgccgtcgtctctctccgacgccaccgccgacgaggac
gacgacaccactgcgccgtcgtccccctcatcggccccttcctctccttcccgcccgtca
tccccatcctcctcccactctgacgatgacgatgacgactcgctgcacacgttcactgcc
gcgcgcctcgacggcgcgccgggtgggggctccgcctccggtcggcccccgaagccggat
tcctcttccgtgtctgccgcagcggcagctgctgccgttgcggcgggggcgggaccgaag
cctgaacccggctctaccgccgccggcgacggcaaggaggaccccaaggggctgttcact
gataacctccagaccagcggtgcgtacagcgcccgcgaggagggcctcaagcgcgaggaa
gactcgggaaggctgaagtttctctgttattctaatgatggtattgatgaacacatgata
tggttggtaggcttgaagaatatcttcgcccggcagcttcctaatatgcccaaagaatat
attgtgcgcctcgtcatggatagaactcacaagtcaatgatggttatcaggaacaatatt
gtcgtgggaggcattacttatcgcccttatgcaagccagaggtttggagaaatagcattt
tgtgctattacagctgatgagcaagttaaaggctatgggacacggttaatgaatcatttg
aagcaacatgcacgagacactgatgggctcacacatttcttaacctatgctgataacaat
gctgtaggctattttgtaaagcagggtttcacaaaggagatcacattggacaaagaaaga
tggcaagggtacattaaagactatgatggaggaatattgatggagtgtaaaattgaccca
aagctgccatacgttgatctggcaacgatgattcggcgtcaaaggcaggccattgatgag
aagataagagagctttctaactgccatattgtttattcaggaattgattttcagaagaaa
gaagccagtattccaagaagactgatgaaaccagaagacatccctggtctgagggaagct
gggtggacacctgatcagtggggccattctaaatcacgttcagcattctcccccgattat
aatacttacagacaacagcttactaacgttatgcggatattgttgaagagtatgaatgaa
catcctgatgcttggccgttcaaagatcctgtggattcacgtgatgttccagactattat
gacattatcaaagatcctatagatttgaggacaatgtcaagaagagtcgagtcggaacaa
tattatgtgaccttagagatgtttgttgccgacatgaagagaatgttcaacaatgcaaga
acctacaactctcctgatactatctactacaaatgtgccacacgactcgagaatttcttc
tcgggcaaaattgcgtcgcagcttgcacaagcctcaaccaagagctag

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