Panicum virgatum (switchgrass): 120693431
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Entry
120693431 CDS
T07260
Name
(RefSeq) protein YABBY 2-like isoform X1
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120693431
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
120693431
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YABBY
YABBY_N
HMG_box_2
HMG_box
Ccdc124
DUF4283
Zn_ribbon_Elf1
Zn_ribbon_12
Zn_ribbon_Com
Zn_ribbon_5
Motif
Other DBs
NCBI-GeneID:
120693431
NCBI-ProteinID:
XP_039832792
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All DBs
Position
9N:complement(14891608..14917659)
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AA seq
191 aa
AA seq
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MSAQIAPPPEHVCYVHCNFCNTILAVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLIPSLP
VQNHSQLVQENFKVHNISFTENYSEYAPTSSKYRMPMMFSTKGDQDHMLHVRAPEKRQRV
PSAYNRFIKEEIRRIKASNPAISHREAFSTAAKNWAHFPNIHFGLGTHESSKKLDEAIGA
AGGPQKVQDLY
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcccagatcgcgccgccgccggagcatgtgtgctacgtgcactgcaacttctgc
aacacaattctcgcggtcagtgtcccgagcaatagcatgctgaacattgtgacagtccgt
tgtgggcattgcactagcctgctgtcagtgaacttgagaggactgatcccatcacttcct
gtccagaatcactcacagttggtgcaggagaatttcaaggttcacaatatcagctttact
gaaaactactctgagtatgcacctacgtcttcaaaataccggatgccaatgatgttctca
acaaaaggagatcaggatcatatgctgcatgtgcgcgctccagagaagaggcaacgtgtt
ccatcagcatacaatagatttattaaggaagagatacggaggattaaagcaagcaacccc
gccataagtcacagagaagcattcagcactgcagcaaagaattgggcacattttccaaac
atacattttggcctagggacccatgagagcagcaagaagctcgatgaggccattggtgcg
gcaggtggtccccagaaagtccaagatctatactag
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