KEGG   Panicum virgatum (switchgrass): 120693489
Entry
120693489         CDS       T07260                                 
Name
(RefSeq) probable nucleolar protein 5-2
  KO
K14565  nucleolar protein 58
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    120693489
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pvir03009]
    120693489
Ribosome biogenesis [BR:pvir03009]
 Eukaryotic type
  Sno RNPs
   Box C/D snoRNPs
    120693489
SSDB
Motif
Pfam: Nop NOP5NT
Other DBs
NCBI-GeneID: 120693489
NCBI-ProteinID: XP_039832867
LinkDB
Position
9N:63865838..63869975
AA seq 566 aa
MLVLFETPAGFALFKVLDEGKLDKVEDLWKEFTTSESARRVVELKAFNKFENTSDALSAA
TLIIDSKPSKSLRKFLQKHCEGETLAVADSKLGNAIKEKLKIDCLHNSAVMELMRGLRNQ
LTELITGLGAQDLGPMSLGLSHSLSRYKLKFSPEKVDTMIIQAIGLLDDLDKELNTYAMR
VREWYGWHFPELTKIVTDNIQYAKVVKMMGNRANAVKLDFSEILSDEDVETQLKEAAVIS
MGTEVNDLDLLNIRELCDQVLALSEYRAQLYEYLKSRMNTIAPNLTALVGELVGARLIAH
GGSLLNLAKQPGSTIQILGAEKALFRALKTKHSTPKYGLIYHASLIGKASQKHKGKISRS
LAAKTALAIRYDALGDGEDNSIGTESRLKLETRLQVLEKTEFGKSAGSAKGKPKIEAYEK
DRKKGAGALITPAKTYNAAADVVLGQSTEETPKKSELASKKRKHHDAEAAPPTKPTAEAI
EEDGDQERKKKKKSKETEETPAADADGEKKKKSKESEEEPAVAAAEGEKKKKKKKSDADG
EDVAMQTEEPGKKDKKKKKKKHADDE
NT seq 1701 nt   +upstreamnt  +downstreamnt
atgttggtgctgttcgagacccccgcggggttcgccctcttcaaggtgctcgacgagggg
aagctagacaaggtcgaggatctatggaaggagttcacgacatcggaatcggcgagaagg
gtggttgagctgaaggctttcaacaagtttgagaacacatctgatgctctctctgctgcg
accctaattattgatagcaagcctagcaagagtctgcgcaagttcttgcagaagcattgt
gagggtgaaacattagctgttgctgattctaagcttggcaatgctataaaggaaaagctg
aaaattgactgccttcacaacagtgctgtgatggagctgatgagagggctgagaaatcag
ctcactgagcttataactgggttgggtgcacaagaccttggtccgatgagcttgggactg
tcacacagcctgtctaggtataagctgaagttcagtcctgagaaggttgataccatgatc
attcaggccattggcttattggatgatcttgacaaagagcttaacacgtatgccatgagg
gttcgtgaatggtatggttggcactttccagagctcactaagatagtcacagataatata
cagtatgcaaaagttgtgaagatgatgggcaacagagctaatgcagtcaagcttgatttc
tctgagatactgtcagatgaagatgtagaaacacagctaaaggaggcagcagtaatatcc
atgggaacagaagttaatgaccttgacctgttaaatatcagagagctatgtgatcaagta
ttggctctttctgagtacagagcgcagctgtacgagtatttaaaaagcaggatgaacact
attgctccaaatctgaccgcactggtgggtgaattagttggtgctcgccttattgcgcat
ggtggcagtttgctaaatttagccaagcagcctggcagcacaattcagatacttggtgca
gagaaggctttatttagagctctaaagacgaagcattctacaccaaagtacggcctcatc
taccatgcatccttaattggcaaggcatctcaaaagcacaagggaaagatatctcgttct
ctcgctgcgaaaactgctcttgccatccggtatgatgcccttggtgatggtgaggacaac
tccattggcacggagagtcgactcaagcttgagacacggcttcaagttcttgagaaaaca
gaatttgggaaatctgctggttccgctaagggaaagcccaagatagaagcgtatgaaaag
gacaggaagaagggtgctggggctttaatcacccctgctaagacctacaacgctgctgcg
gatgttgtactggggcaatccactgaagagacaccaaagaagtcagaattggcttcaaag
aagaggaaacatcatgatgcggaggctgcaccgccaacaaagcctacagcagaagcaatc
gaggaggatggtgaccaggaaaggaagaaaaagaagaagtccaaggaaactgaggagact
cctgcggctgacgctgatggtgagaagaaaaagaaatctaaggagagcgaggaggagcct
gctgtggccgctgcagaaggagagaagaagaaaaaaaagaagaaatctgacgcagatggt
gaggatgttgcaatgcaaaccgaggagccgggcaagaaagataagaagaaaaagaagaaa
aagcacgccgatgatgagtga

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