Panicum virgatum (switchgrass): 120693489
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Entry
120693489 CDS
T07260
Name
(RefSeq) probable nucleolar protein 5-2
KO
K14565
nucleolar protein 58
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120693489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120693489
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
120693489
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GFIT
Motif
Pfam:
Nop
NOP5NT
Motif
Other DBs
NCBI-GeneID:
120693489
NCBI-ProteinID:
XP_039832867
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Position
9N:63865838..63869975
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AA seq
566 aa
AA seq
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MLVLFETPAGFALFKVLDEGKLDKVEDLWKEFTTSESARRVVELKAFNKFENTSDALSAA
TLIIDSKPSKSLRKFLQKHCEGETLAVADSKLGNAIKEKLKIDCLHNSAVMELMRGLRNQ
LTELITGLGAQDLGPMSLGLSHSLSRYKLKFSPEKVDTMIIQAIGLLDDLDKELNTYAMR
VREWYGWHFPELTKIVTDNIQYAKVVKMMGNRANAVKLDFSEILSDEDVETQLKEAAVIS
MGTEVNDLDLLNIRELCDQVLALSEYRAQLYEYLKSRMNTIAPNLTALVGELVGARLIAH
GGSLLNLAKQPGSTIQILGAEKALFRALKTKHSTPKYGLIYHASLIGKASQKHKGKISRS
LAAKTALAIRYDALGDGEDNSIGTESRLKLETRLQVLEKTEFGKSAGSAKGKPKIEAYEK
DRKKGAGALITPAKTYNAAADVVLGQSTEETPKKSELASKKRKHHDAEAAPPTKPTAEAI
EEDGDQERKKKKKSKETEETPAADADGEKKKKSKESEEEPAVAAAEGEKKKKKKKSDADG
EDVAMQTEEPGKKDKKKKKKKHADDE
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgctgttcgagacccccgcggggttcgccctcttcaaggtgctcgacgagggg
aagctagacaaggtcgaggatctatggaaggagttcacgacatcggaatcggcgagaagg
gtggttgagctgaaggctttcaacaagtttgagaacacatctgatgctctctctgctgcg
accctaattattgatagcaagcctagcaagagtctgcgcaagttcttgcagaagcattgt
gagggtgaaacattagctgttgctgattctaagcttggcaatgctataaaggaaaagctg
aaaattgactgccttcacaacagtgctgtgatggagctgatgagagggctgagaaatcag
ctcactgagcttataactgggttgggtgcacaagaccttggtccgatgagcttgggactg
tcacacagcctgtctaggtataagctgaagttcagtcctgagaaggttgataccatgatc
attcaggccattggcttattggatgatcttgacaaagagcttaacacgtatgccatgagg
gttcgtgaatggtatggttggcactttccagagctcactaagatagtcacagataatata
cagtatgcaaaagttgtgaagatgatgggcaacagagctaatgcagtcaagcttgatttc
tctgagatactgtcagatgaagatgtagaaacacagctaaaggaggcagcagtaatatcc
atgggaacagaagttaatgaccttgacctgttaaatatcagagagctatgtgatcaagta
ttggctctttctgagtacagagcgcagctgtacgagtatttaaaaagcaggatgaacact
attgctccaaatctgaccgcactggtgggtgaattagttggtgctcgccttattgcgcat
ggtggcagtttgctaaatttagccaagcagcctggcagcacaattcagatacttggtgca
gagaaggctttatttagagctctaaagacgaagcattctacaccaaagtacggcctcatc
taccatgcatccttaattggcaaggcatctcaaaagcacaagggaaagatatctcgttct
ctcgctgcgaaaactgctcttgccatccggtatgatgcccttggtgatggtgaggacaac
tccattggcacggagagtcgactcaagcttgagacacggcttcaagttcttgagaaaaca
gaatttgggaaatctgctggttccgctaagggaaagcccaagatagaagcgtatgaaaag
gacaggaagaagggtgctggggctttaatcacccctgctaagacctacaacgctgctgcg
gatgttgtactggggcaatccactgaagagacaccaaagaagtcagaattggcttcaaag
aagaggaaacatcatgatgcggaggctgcaccgccaacaaagcctacagcagaagcaatc
gaggaggatggtgaccaggaaaggaagaaaaagaagaagtccaaggaaactgaggagact
cctgcggctgacgctgatggtgagaagaaaaagaaatctaaggagagcgaggaggagcct
gctgtggccgctgcagaaggagagaagaagaaaaaaaagaagaaatctgacgcagatggt
gaggatgttgcaatgcaaaccgaggagccgggcaagaaagataagaagaaaaagaagaaa
aagcacgccgatgatgagtga
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