Panicum virgatum (switchgrass): 120693545
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Entry
120693545 CDS
T07260
Name
(RefSeq) formin-like protein 5 isoform X1
KO
K28090
formin
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120693545
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
120693545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
PTEN_C2
Motif
Other DBs
NCBI-GeneID:
120693545
NCBI-ProteinID:
XP_039832933
LinkDB
All DBs
Position
2K:complement(62918952..63032682)
Genome browser
AA seq
1649 aa
AA seq
DB search
MALFRKFFLKKTPDRLLEISERVYVFDCCFSTDSMGEDEYRDYLSGIVAQLQEFFPDASF
MVSNFWSGDKRSRISDILSEYDMTVMDYPQQYEGCPLLQLEMIHHFLKSCENWLSVEGQH
NMLLMHCERGGWPVLAFMLAGLLLYRKTYTGEHKTLEMVYKQARRDFIQHFFPLNPQPSH
LRYLHYITRQGSGSEWPPISRPLILDSVVLHVVPRFDSEGGCRPYLRVHGQDSSPGNKSA
KVLFEMPKTKKHLLRYGQAEAPVKISAFCRVQGDVVLECIHIGDNLEHKETMFRVMFNTA
FIQSNILGLNRDDIDVSWNMNNQFPRDFRAEVLFSDPDSFKPAVATVEVADDGDETDVAS
VDTGDEFYEAEEDWHDARRDPETQSVDGRLSLDGIVELDGAVANEERSSLVKHDIDGDVK
TVISHFENPEGLQQVQQDLAKSKLNHTGGQENSDVQDIQVVATSVDSEGHKFSSICQEED
TKDVIAQTLVTTVDPTCSDEIQCQTSEPTKNLKYADLDYTAFDAPRSLSCTEGDTHLRTT
TKGGLQNGDIKIISENTVIVDNELVIYEEKTIVENGNIIPEVKNVVNEKSGLPMIGRTAI
KSRNAHDNSSGNIKSVKPSDTADGKLDQGKLEDGLEETIPTKHTNVHDRIVVLPATEVAT
EIKTKRQGPVGKQDISIALPQSRTEARASSPKFESDDRGQIPDKAVSSVLKKMAADNAAQ
TEEEPKVAKPKTIRRWVSPKRESDATSVHRPSHPPSRYYSSPAALAIRSLSTDGKINAVK
DAPLVLLMEPHSSHLTEESVYTLSAPSPARRSLLPGAQIASRSEAPPPPPPPSALLNSSS
GAQKQIFAPPPPPPRSGIGGNTPPPPPMLNNMVTPPPPPPPPPPPPPPKLSSSVPPSPPP
PPFTITRSSAPPPPPPPPPSMAHSAPPPPSPPPPPPSLRSSAPPQPPLSVTRYAPPPLPP
PPPPPLAATVCSRAPPPPPPPPPPPLLTCSSTPPPPPPPPSRGAPPPPPPPLSRGAPPPP
PPPPSRGAPPPPPPGQGAPPPPPPPPPVGRGATPPPPPPPGCGAPPPPPPPPGRGAPPPP
PPSLGARGNPPPPPPPPGARPGPPPPPPPPGAPHPPPPPGLRPGAPPPPPPPGSRLGAPP
PPPPPGLRPGAPPPPPPAPGGRHGGPPPPPPSGHAPGAPAPPRALGVPPPPGGNPSLGRG
RGAARPLGSAYGAAASRKSTLKPLHWVKVTRALQGSLWEELQRNGELQSVSEFDISELES
LFPAAVPKSDDSSKSERRKSLGSKPEKVHLIELRRANNTEIMLTKVKMPLSDLVSAALAL
DQSTLDVDQVENLIKFCPTKEEMELLKNYTGDKDNLGKCEQFFLELMKVPRMESKLRVFS
FKIQFGSQVADLRKSLNVIDSSCDEIRSSLKLKEIMKKILLLGNTLNQGTARGAAVGFRL
DSLLKLTDTRATNNKMTLMHYLCKVLAARSPQLLNFYVDLVSLDAASKIQLKMLAEEMQA
VSKGLEKVQLEYDASEKDGPVSEIFRKKLKEFTDNAGADVQSLSSLFSEVGKKADALIKY
FGEDPVRCPFEQVISTLLTFVTSFRKAHEENLKQAELEKKKAEKDAEAEKAKSAQLTSKN
DSKPSNPSRQAKQTIERTRSANRRGRDVG
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcttccgcaagttcttcctcaagaagaccccggatcggctgctcgagatctcc
gagcgcgtctacgtttttgactgctgcttctcaactgattccatgggtgaggatgagtat
cgggattacttgagcggcattgttgcgcagttgcaggaatttttccctgacgcatcattc
atggtatccaatttctggtctggtgacaagaggagccggatttcagatatattatccgag
tatgacatgacagtaatggactatccacaacaatatgaaggatgtccgttgcttcagctt
gagatgatccaccatttcttgaaatcatgtgaaaattggctttcagtggaaggacagcat
aacatgctcttgatgcattgtgagagagggggatggccagttcttgcatttatgttggct
ggactccttttgtatcggaaaacatacactggcgagcacaagacactagagatggtctac
aagcaggctcgcagggactttatacagcatttttttccattaaatcctcagccttcgcat
ttgagatacttgcactatataaccaggcaaggaagtggttcagaatggcctcctattagc
cggcctcttatcctagattcagttgttctccatgttgttccgcggtttgacagcgaagga
ggttgtaggccgtatttacgtgtacatgggcaagactctagtcctggtaacaagagcgca
aaggtcctttttgaaatgccaaagacaaagaagcatcttctgcgttatgggcaggcagaa
gccccggtaaaaatcagtgcattctgccgtgttcaaggagatgtggttcttgaatgcatt
catattggcgataacctagagcataaggaaacaatgttccgggtcatgttcaacactgca
ttcattcaatcaaacatccttggactgaatcgtgatgatattgatgtttcttggaatatg
aataatcagtttccaagggattttcgagctgaggtacttttttcggaccctgattcgttc
aagcctgctgtcgccaccgtggaggtagctgatgatggggatgagactgatgttgcttcg
gtagacacgggagatgaattttacgaagcagaggaggattggcatgatgctagaagggat
ccagaaactcagtcagttgatggtagattatcattagatggcattgtagaattggatggc
gctgtagcaaatgaagaaaggagcagcctagttaagcatgatattgatggagatgtgaag
actgttatatcccactttgagaatccagaaggtttgcagcaggtccaacaggatcttgcg
aagtctaaattaaaccacacaggtggccaagagaacagtgatgtgcaggacatacaggtg
gttgcgacatctgttgattcagagggacacaaattctcatctatctgtcaggaggaggac
acgaaagatgtaattgcacaaactttagtcacgacagtggatccaacttgcagtgatgaa
attcaatgccagaccagtgaaccaacaaaaaatttgaaatatgctgatctggattatact
gcttttgatgcgcctagaagtttgtcatgcacagaaggggatacccacttgaggactaca
acaaaaggaggattgcagaatggtgatatcaagattattagtgagaacactgtaatcgta
gacaatgagctagtgatctatgaagagaaaactatagttgagaatggcaacattattccg
gaagtaaaaaatgttgtcaatgagaaaagtggccttcctatgataggtagaacagccatt
aagagtaggaatgcacatgataacagctctggcaatattaaatctgtcaaaccttctgat
acagctgatggcaaattggatcagggaaaattagaggatggccttgaagaaaccatacct
acaaagcacaccaatgtgcatgacagaattgttgtgttaccagccactgaagtagcaact
gaaataaaaactaagagacagggtcctgttggcaaacaagatattagcatagctcttcct
caaagtcgaacagaggctagggctagcagcccgaagtttgaaagtgatgaccgagggcaa
atccctgataaagctgtgtcatcagtgttgaagaagatggcagcagacaatgcagcccag
acagaagaagaaccaaaggttgccaaaccgaaaacaatacggagatgggtttctccaaaa
agggaatctgatgctacctctgtgcataggccatcacatccaccatccagatactatagt
tcaccagctgcactggctatacgatccttgtctacagatggcaaaatcaatgctgtgaag
gatgcacctctagtattgctgatggaaccgcatagtagtcacttaacagaagaatcagta
tatacgctgtctgctccatcacctgcacgacgatccttgttaccgggtgcacaaattgca
tcaagaagtgaagctccaccgcctccgcctccaccatcagctctgctcaactcctcttct
ggagcacaaaaacagatctttgcccctcctcccccacccccgaggtcaggcattggtgga
aatactccaccaccacctccaatgctaaacaacatggtcacgccgccgccgccgccacca
ccgccaccaccaccaccaccaccaaagctaagttcaagtgtcccaccctcacctcctcca
cccccattcaccataacacgttcaagtgctcctcctcctccaccaccaccaccaccatca
atggcacattctgctcctcctcccccatcaccacctcctcctccaccatccttgcgttct
agtgctccaccgcaaccccctctctcagttacacgttatgctccacctcctctgccaccg
ccaccgccgccaccactagcagctacagtatgttctagagctcctcctcctcctcctcct
cctccaccacctcctctattgacatgttcatcaacacctcctcctccacccccacccccc
agccgaggagcaccccctcccccacccccacccctcagccgaggagcgccgcctccccca
cccccaccccccagccgaggagcgccccctcccccaccccctggccaaggagcgcctcct
ccgccacccccaccccctcctgttggacgaggagcaaccccacctccaccccctccccct
ggttgtggagcgcccccacctccacctcctccccctggccgaggagcacccccaccccca
cctccttccctaggcgcacgtggaaaccctccaccacctccaccccctccaggtgctcgc
cctggccctccacctcctccaccccctccaggcgctccacatccaccacctcctccaggt
ctgcggccaggagctccacctccacctcctcctccaggttcacgactaggagctccaccc
ccaccacctcctccaggtctgcgaccaggagctccacctccaccacctcctgcacctgga
gggcggcatggtggccctcctcctcctcctccaagtgggcatgcaccaggtgcgccagct
ccacctagagcacttggtgtaccaccaccaccgggaggtaatccttccttaggcagagga
cgtggggctgcacgccctctgggatcagcatatggggctgctgcctcacgtaagtcaaca
ttgaagcctctgcattgggtcaaagtgacaagggccctgcaaggtagcctgtgggaggaa
ttacaacgcaatggtgaactacagagtgtttcagagtttgatatatcagaacttgaaagc
ctttttccggcagcagttccaaagtctgatgatagctcaaaatctgaacgtagaaaatca
cttggctcgaaaccagaaaaagttcaccttatcgagttgaggagggcaaacaacacagaa
ataatgctaacaaaagtgaagatgccactctcagatttggtgagtgcagctctggcactg
gatcaatcgaccttggatgttgatcaagttgagaatctcataaagttttgtcctacgaaa
gaagaaatggaacttctcaagaattacactggagacaaggacaaccttgggaagtgtgaa
cagttcttcttagaattgatgaaagtgccacgaatggagtcaaaactgcgagtgttctcc
ttcaagatccagtttggttcgcaagtcgcagatcttagaaaaagcttgaacgtcatagat
tcttcgtgcgatgagatccgaagttctctcaagttgaaagaaataatgaagaaaatcctt
ctcctcgggaatacactgaaccagggaactgctagaggtgctgcggtaggcttccggttg
gacagtcttctaaaacttactgatacccgagcaacaaataataagatgacattaatgcac
tacctctgcaaggtacttgctgcaagatctccacaacttttaaacttctatgttgatctt
gttagtttagatgccgcatcaaagatacaactaaaaatgctggctgaggaaatgcaagca
gttagcaaagggctggaaaaagttcagctggagtatgatgcttcagaaaaggatggtcca
gtatcagaaatatttcgcaagaaactgaaagagttcacggacaatgctggagctgatgtg
cagtcgttatcatcgctgttttctgaagtgggcaaaaaggcagatgcactgattaaatac
tttggtgaggatcccgttcgttgcccctttgagcaagtgatctctaccctattaactttc
gtaacatcatttcgaaaagcacacgaggagaacctcaaacaagctgagcttgagaagaaa
aaagctgaaaaggacgcagaagccgagaaggccaaaagcgctcaattgactagcaaaaat
gactctaaaccatcaaatccaagccggcaagctaaacaaactatagagaggacaaggtct
gcaaacagacgaggaagagacgtgggatga
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integrated database retrieval system