Panicum virgatum (switchgrass): 120693972
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Entry
120693972 CDS
T07260
Name
(RefSeq) regulatory-associated protein of TOR 1 isoform X1
KO
K07204
regulatory associated protein of mTOR
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
120693972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120693972
Membrane trafficking [BR:
pvir04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
120693972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
HEAT
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
HEAT_EZ
EIF3I
HEAT_2
Beta-prop_DCAF4
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Lgl_C
Motif
Other DBs
NCBI-GeneID:
120693972
NCBI-ProteinID:
XP_039833072
LinkDB
All DBs
Position
Unknown
AA seq
1422 aa
AA seq
DB search
MYVTKLPDLTSSWLPAEGDKQETHPASMALGDLMASRLVHYSSSPSPSPSPSMAAPTPPL
PNHHHNHVTDDLPVANGPEPRNGLEVAEVEKPAPVVYLPQVVVVLCEQRHEGIDEAAAAA
GPSTSGLVSKWRPKDRMKTGCVALVLCLNISVDPPDVIKISPCARMECWIDPFSMAPPKA
LENIGKTLHSQYERWQPKARYKLQLDPTVEEVKKLCNTCRRYARSERVLFHYNGHGVPKP
TTNGEIWVFNKSYTQYIPLPITDLDSWLKTPSIYVFDCSAAGIIVKAFLERLDWSSSSSS
SSQKDCILLAACEAHQTLPQSAEFPADVFTACLTTPIKMALHWFCKRSLLRGSMDHSLID
QIPGRQNDRKTLLGELNWIFTAITDTIAWNVLPHDLFQRLFRQDLLVASLFRNFLLAERI
MRSANCSPISYPLLPPTHQHHMWDAWDMAAEICLSKLPQLIADPNAEFQPSPFFTEQLTA
FEVWLDHGSEDKKPPEQLPIVLQVLLSQSHRFRALVLLGRFLDMGPWAVDLALSVGIFPY
VLKLLQTSAMELRQILVFIWTKILSLDKSCQVDLVKDGGHAYFIRFLDSLDAYPDQRAMA
AFVLAVIVDGHRTGQEACIHACLIDVCLRHLQPENPHDAQAEPLLLQWLCLCLGKLWEDF
AEAQLLGLQSNAPEILIYLLSEPQPEVRASAVFALGNLLDMGSTSSNGADDDSDDDEKVK
AEINVVRSLLQVSSDGSPLVRCEVAIALTRFALGHNKHLKSVAAEYWKPQTNSLLKSPPS
LANISSPNNVYSPNNIRQGSSGLASHIGPVLRVGSDSSATGRDGRVSTSSPIATSSILHG
SPQSDDSSQHSDSGILLRDNASNGGLSYTRSRPADSVIYSQYISTMCSVAKDPYPRIATI
GRRALSLIGVEQVVMKNSRFNSGGAHQGETSAPPSNFGMARSSSWFDMNSGNFSIAFRTP
PVSPPQHDYLTGLRRVCSMEFKPHPMNSPEGLADPLLSSAAAPSNADLSILPKSTIYNWS
CGYFSRPLLTGSDDNEEAHARREERGQITLDCIAKCQRSCTWPTLVRITLFLLIFLLIYL
FLLLLWGLGIAACKMTSQIASWDTRFDSGTKAALLLPFSPIVIAADENEQIRVWNYDDAL
PVNSFQNHKLSDRGLSKLLLINELDESLLLAASSDGNVRIWKNFTQKGGQKLVTAFSSVQ
GHRAAGRSIVIDWQQQSGCLYASGDMSSILVWDLDKEQLLSTIQSSGDSAISALSASQVR
SGHFAAGFADGSVRIFDVRSPDRLIYMARPHAPRTEKVVGIGFQPGFDPYKIVSASQAGD
IQFLDVRRAAEPYLTIEAHRGSLTALAVHRHAPVVASGSAKQMIKVFSLEGEQLTIIRYQ
PSFMGQRIGSVNCLSFHPYKSLLAAGAGDNALVFIYAEENYK
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgaccaagctccccgacctcacctcgtcatggctgccggctgagggggataag
caggagacacacccagcgtccatggcattgggagatctcatggcgtccaggctcgtccac
tactcgtcctcgccgtccccatcgccgtcgccatcgatggccgcgcccacgccgccgctg
ccgaatcaccaccacaaccacgtcacggatgacctccccgtcgccaacggtccggagccc
aggaatgggctggaggtcgccgaggtggagaagccggcgcccgtggtgtacctgccccag
gtggtggtggtgctgtgcgagcagcgccacgaggggatcgacgaggctgctgccgccgcc
gggccctccaccagcggcctcgtctcaaagtggcgcccaaaggaccggatgaagactgga
tgtgttgcccttgtattatgtttgaacattagtgttgatccaccagatgtaattaaaatc
tccccttgcgcaagaatggagtgctggatagatccattttctatggcacctcctaaggcc
cttgaaaatattggaaaaactttgcactcacagtatgagcgctggcaacctaaggctcgt
tacaagcttcagctagatccaactgtggaggaagttaagaagctttgtaatacttgccgc
agatatgccagatcagagagagtccttttccattacaatggccatggtgtaccaaagcct
acaactaatggtgagatttgggtgtttaacaagagttacacgcagtatattccacttccg
attactgatcttgattcttggctaaaaacaccttccatttatgtttttgactgctcagca
gctggaattattgtgaaagcttttctagagcgcctagactggagttccagctcctcttcg
tcttcgcagaaggattgcattcttcttgctgcctgcgaagcacatcaaacacttccccag
agtgcagaatttcctgctgatgtgtttacggcttgccttacaacacccatcaagatggca
ttgcactggttttgtaagagatcattactccgtggttctatggatcattctcttattgac
caaattcctggaaggcaaaatgaccgtaaaactcttcttggagaactgaattggattttc
actgccattacagacactattgcatggaatgttcttcctcatgatctattccaaaggctt
ttcaggcaagatcttctggttgctagtctcttccgtaacttcctgcttgctgagagaatc
atgcgatccgcaaattgttctccaatttcttatccgttgttaccaccgacacatcaacac
catatgtgggacgcatgggacatggctgctgagatttgcctttccaagcttcctcagtta
attgctgatccaaatgcagagtttcagccaagcccttttttcacggaacaactgacggct
tttgaagtgtggcttgatcatggttctgaggacaagaagcccccagaacaattacctata
gttcttcaggtcctgcttagtcaatcacatagattcagagcgcttgttttgcttggaaga
tttcttgacatgggaccatgggcagttgatttggccctgtctgttggaatctttccttat
gtgctcaaactgcttcaaacaagtgcaatggagttgcgtcaaattcttgtgttcatatgg
acgaaaattctatctcttgataagtcgtgccaggtggacttggttaaagacggaggacat
gcatattttatcaggtttcttgacagtttggatgcttacccagatcagcgtgcaatggcc
gctttcgttttagcagttattgtggatgggcataggacgggtcaagaggcctgtattcat
gcatgtcttatagatgtttgtctgagacatctgcaacctgaaaatccccatgatgcacag
gcagagcctttgcttttgcagtggctttgtttatgccttggcaaactctgggaagatttt
gctgaggctcagttacttggtctgcaatcaaatgcaccagaaattttaatttatttgtta
tcggagccccaacctgaggtcagagcttctgctgtttttgcacttgggaatcttctggat
atgggatcaacatcatcaaatggcgccgatgatgattctgatgatgatgaaaaagtaaaa
gctgaaataaatgtcgttcgaagccttctgcaggtttcttcagatggtagcccccttgtt
agatgtgaggttgctatagcgcttactcgttttgcattgggtcacaataagcatctcaaa
tctgttgctgctgagtattggaaacctcaaaccaattcattgctgaagtcacctccatca
ctggccaatataagtagtccaaacaatgtctacagtcccaacaacattcgacaaggcagc
agtggtcttgcttctcatattggtcctgtgctaagggttggcagtgatagcagtgccact
ggtcgtgatggaagggtttctacgagcagcccgattgcgacaagtagcatcctgcatggc
tctccccagtcagatgattcttcccaacactctgattcaggcatattactgagagacaat
gcaagtaatggtggcctcagctacactagatcgaggcctgctgacagtgtcatttattct
caatatatatcaactatgtgttctgttgctaaagatccttacccaagaattgcaactatt
ggtcggagagcactgtcccttataggtgtcgagcaagtggtcatgaaaaacagtagattt
aacagtggaggtgcacatcaaggggagacatctgcacctccatcaaactttggaatggca
cgctcttcttcctggtttgatatgaattctggaaacttctcaattgcatttaggacgcct
cctgttagcccccctcaacatgattatcttacaggattacgccgagtgtgttctatggag
ttcaaaccacatcctatgaattctcctgagggcttagctgatccccttttgagctctgct
gcggctcccagtaatgctgatctaagcatacttcccaaatcaacaatttacaactggagt
tgtggatacttctctaggccacttttaactggttctgacgataatgaagaagcccatgct
agaagagaagagagaggacaaattacactagattgcattgctaagtgccagagatcatgt
acgtggcctacattagtccgcattacattatttttgttgatattcttgcttatttacctg
tttttattattattgtggggcctgggaatagcagcttgcaagatgacaagccaaattgct
agttgggatacaaggtttgattcaggtacaaaagcagcattattgttgccattttctcca
atcgtcattgcagctgatgaaaatgaacaaataagagtgtggaactacgatgatgcacta
cccgtgaactcttttcaaaaccataaattgtccgacagagggctatcgaaactcttgctt
atcaacgagcttgatgagagcttgcttttagctgcctcaagtgatggaaatgtacgtata
tggaaaaattttactcaaaagggaggacaaaaacttgtaactgctttctcatcagttcag
ggtcatcgagctgctggtcgcagtattgtgatcgattggcagcagcaatctggttgcctg
tatgcatctggtgacatgtcttccatcttggtatgggatcttgacaaggaacaacttctc
agcaccattcagtcatctggtgacagtgcgatttctgccctctctgcatctcaggtccgc
tctggacactttgctgctggttttgctgatggttctgtcaggatatttgatgttcgctct
cctgatagactgatctatatggcaaggccacatgccccaagaacggaaaaggttgtgggc
atagggtttcagcctgggtttgatccatacaagattgtaagtgcatctcaagctggagac
attcagtttctggatgttagaagagcagcagaaccctacctgactattgaggcacacagg
ggttcacttactgctttagctgttcatcggcatgccccagttgttgctagtggctcagcc
aagcagatgattaaagtgttcagtcttgaaggagagcagttgacgataattcgctaccag
ccatcatttatgggccaaagaataggcagtgtaaactgcctttctttccacccgtacaaa
tcactcttggccgctggtgctggtgataatgctcttgtctttatctatgccgaggaaaat
tacaagtaa
DBGET
integrated database retrieval system
