Panicum virgatum (switchgrass): 120693985
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Entry
120693985 CDS
T07260
Name
(RefSeq) F-box/LRR-repeat protein 3-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120693985
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120693985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
LRR_8
LRR_14
LRR_EndoS
LRR_Zer-1
LRR_At1g61320_AtMIF1
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
120693985
NCBI-ProteinID:
XP_039833110
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MSHCQNVTDVGVSSMVKSIPNLLELNLSYCCPVTPSMGRSLQKITKLRTLKLEGCKFMAD
GLKGIGSSCVSIRELSLSKCSGVADTELSFAVSKLKNLLKLDITCCRNITDVSVAAITSS
CTSLISLRMESCSHVSSGALQLIGKHCPHLEELDLTDSDLDDAGLKALARCSNLSSLKIG
ICLRISDEGLTHIGKSCPKLRDIDLYRCGGISDDGVIQIAQGSPMLESMNLSYCTEITDR
SLMSISKCTKLNTLEIRGCPRVSSAGLSEIAMGCRLLSKLDIKKCFEINDVGMLYLSQFS
HCLRQINLSYCSVTDIGLLSLSSICGLQNMTIVHLAGITPNGLTAALMVCGGLTKVKLHE
AFKSMMPPHMLKNVEARGCMFQWINKPFKVEVEPCDVWKQQSQDVLVR
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtctcattgtcagaatgtcactgatgtgggagtttcgtcgatggtgaagtcaataccg
aatctattggaactgaatctttcgtactgctgtcctgttactccttctatggggagaagc
ctccaaaagattactaaactgcggacgctgaagctggaaggctgcaaattcatggctgat
ggactaaaaggcattggaagctcttgtgtttctatcagggagctaagtctgagcaagtgc
tctggagtagcagatactgaactctcttttgctgtgtcaaaactaaagaacctgctgaag
ctggacatcacttgttgtcgcaatatcactgatgtttcagtagctgccatcactagttcg
tgcacttccctcatctctctgaggatggagtcttgtagccatgtttcaagtggagcactc
caactgatcgggaagcactgtcctcacttggaagagttggaccttactgacagtgatttg
gatgatgcagggttgaaagctctcgccagatgcagcaacctctcgagcctaaaaattggt
atttgcttgaggataagtgatgaaggtctgacccacattggaaaatcttgcccaaaactc
cgagacattgatttgtacaggtgtggaggcattagtgatgatggggttattcagattgct
caaggcagtccaatgctagaatctatgaatctatcctactgtacagaaataacagaccgt
tcactaatgtccatctcaaaatgcacaaagttaaatacattggagattcgtggctgcccc
agggtttcatccgctggtctctcagaaatagcaatgggttgcaggctgctttccaagctt
gatattaagaaatgctttgagattaatgatgtgggcatgctctacctttcccagttctct
cattgcctccgtcagataaacttgtcatactgttcggtcaccgacattggactcctttcc
ctttctagcatatgtggcttgcagaacatgaccattgtacatttagcgggtattacacct
aatggcttgacagctgctctcatggtctgtggtggtttgacaaaagtgaagcttcatgaa
gcattcaaatccatgatgcctcctcatatgctaaaaaatgttgaggcgcggggttgtatg
ttccagtggatcaataaaccatttaaggttgaggtggaaccttgtgatgtatggaagcaa
cagtcacaagatgtgcttgtacgatga
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