Panicum virgatum (switchgrass): 120694313
Help
Entry
120694313 CDS
T07260
Name
(RefSeq) MADS-box transcription factor 18-like
KO
K09264
MADS-box transcription factor, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120694313
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
120694313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
CCDC84
Het-C
Cytotoxic
Ribosomal_L10
Abi_2
DUF2252
Motif
Other DBs
NCBI-GeneID:
120694313
NCBI-ProteinID:
XP_039833397
LinkDB
All DBs
Position
2K:63587150..63592180
Genome browser
AA seq
253 aa
AA seq
DB search
MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVALIVFSTKGRLYEYSSN
DSMEGILERYQRYSFEERAVLDPNIGDQANWGDEYGWLKTKLDALQKSQRQLLGEQLDSL
TVKELQQLEQQLDSSLKHIRSRKNQLMFDSISELQKKEKSLTDQNGVLQKLMEAEKEKNN
ALMNAHLREQQNGASTSLPSPPPSTVPDSMPTLNIRPCQPREGTVGESEPESSPAQVNSG
KLPPWMLRSVSNR
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcgggccggtgcagctgcggcggatcgagaacaagatcaaccgccaggtgacc
ttctccaagcgccggaacgggctgctgaagaaggcgcacgagatctccgtgctctgcgac
gccgaggtcgcgctcatcgtcttctccaccaaggggaggctctacgagtactccagcaat
gacagcatggaaggcattcttgagcgttaccaacgatactcgtttgaagaaagagcagta
cttgatccaaatattggagaccaggcaaactggggagatgaatatggctggttaaagacc
aaacttgatgcacttcagaagagtcagaggcaactgttaggagaacaactggattcactt
accgtaaaagaactccagcaactggagcaacaactggacagctctctgaagcatataaga
tcaagaaagaatcagctcatgtttgattcaatttctgagcttcagaaaaaggagaaatca
cttacagatcaaaatggtgtcctgcaaaagctcatggaggcagagaaagagaaaaacaat
gcattaatgaatgcacacctccgggagcagcaaaatggagcatcaacaagcttgccatca
ccaccgccatcaacagttccagattccatgccaactctaaatattaggccgtgtcaacct
agagaaggaacagtaggggagtctgaacctgaatcgtctcctgctcaagtgaacagcggc
aagctgcctccatggatgctacgcagtgtcagtaacagatga
DBGET
integrated database retrieval system
