Panicum virgatum (switchgrass): 120694446
Help
Entry
120694446 CDS
T07260
Name
(RefSeq) pectinesterase QRT1-like
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00040
Pentose and glucuronate interconversions
pvir01100
Metabolic pathways
Module
pvir_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120694446
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
120694446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
Motif
Other DBs
NCBI-GeneID:
120694446
NCBI-ProteinID:
XP_039833492
LinkDB
All DBs
Position
2K:complement(63684602..63688032)
Genome browser
AA seq
377 aa
AA seq
DB search
MAAAGRERRCVVRAAVVVLLLVAASVPTAAGGGADGFITWDDLSIPGAAAAVAGPRGVSD
GAAGGSGGVKARARHDLETIVVSQDGTGHSRTVQGAVDMVPAGNRRRVKILVRPGVYREK
VTVPITKPFVSLIGMGTGRTVITWNARAADIDPSGHQVGTFYSASVAIEADYFCASHITF
ENSAPAAPPGAVGQQAVALRLSGDKTMLYRCRILGTQDTLFDNIGRHYLYNCDIQGSIDF
IFGNARSLYQGCTLHAVATGYGAIAASQRSSPAEDSGFSFVGCRLTGFGTLYLGRAWGRY
ARVVYSYCDLSGIVLPQGWSDWGDRSRTKTVLFGEYSCKGPGASTRQRVPWSRALTYEEA
RPFLGRSFINGEQWLRL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgggcgcgagcgacgctgcgtcgtccgcgcggccgtcgtcgtcctcctg
ttggtcgccgcgtcagtccccacggcggcgggcggcggcgcggacgggttcataacgtgg
gatgacctcagcatcccgggggcagccgccgccgtggccgggccgcgcggcgtgtcggac
ggcgccgcgggcggaagcggcggcgtgaaggccagagcgcgccacgacctggagacgata
gtggtgtcgcaggacgggacggggcactcccggaccgtgcagggtgccgtcgacatggtg
cccgccggcaaccggcgccgcgtcaagatcctcgtcaggcccggcgtgtacagggagaag
gtgacggtgccgatcacgaagcccttcgtgtcgctcatcggcatgggcaccgggcgcacg
gtgatcacctggaacgccagggcggcggacatcgacccgtccggccaccaggtcggcacc
ttctactccgcctccgtcgccattgaggccgactacttctgcgccagccacatcaccttc
gagaactccgcgccggcggcgccgccgggggcggtcgggcagcaggcggtggcgctgcgg
ctgtccggcgacaagaccatgctgtacaggtgcaggatcctggggacgcaggacacgttg
ttcgacaacatcggccggcactacctctacaactgcgacatccagggctccatcgatttc
atatttgggaacgcaaggtccctgtaccaggggtgcacgctgcacgcggtggcaacgggc
tacggcgccatcgcggcgtcgcagcggagctcgccggcggaggactccgggttctcgttc
gtggggtgccggctcaccggcttcggcacgctgtacctgggccgggcgtggggcaggtac
gccagggtcgtctactcctactgcgacctcagcggcatcgtcttgccccagggctggagc
gactggggcgaccgatcaaggacaaagacggtgctgttcggggagtacagctgcaagggt
ccaggggcgagcacgaggcagcgggtgccttggtcccgggcgctcacctacgaggaggcg
cggccgttcctcggccggagcttcatcaacggcgagcagtggctcaggctgtag
DBGET
integrated database retrieval system