Panicum virgatum (switchgrass): 120694450
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Entry
120694450 CDS
T07260
Name
(RefSeq) nuclear transcription factor Y subunit A-4-like isoform X1
KO
K08064
nuclear transcription factor Y, alpha
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120694450
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
120694450
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Gene cluster
GFIT
Motif
Pfam:
CBFB_NFYA
PAP1
SLC52_ribofla_tr
Motif
Other DBs
NCBI-GeneID:
120694450
NCBI-ProteinID:
XP_039833499
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Position
2K:complement(63721627..63727060)
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AA seq
290 aa
AA seq
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MPKLLREVEDHPVHPMSKSNHGFLSGNDHEMKHLGHKIHDKDLSSESGQSHQEAPAVSES
SLNENTSTQSDNDEGHGKHNQDTVHTVLSMGKQGSAFLPPKLDYNRSFACLPYTADAYYG
GVLTGYPPHAVAHPQQNHTTNAPVMLPAEPAEEEPIYVNAKQYHAILRRRQTRAKLEAQN
KLVKGRKPYLHESRHRHAMKRARGSGGRFLNTKQLQQTQQHQASGGSSSSKVIGNSISSQ
SDPTPAPSTSTPSDTASASRANQDRTCFPVGLRPAMNFSAPGGEGAKLVR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcttttacgggaagtggaggatcatccggttcatcccatgtctaagtcaaac
catggcttcttgtcaggaaatgaccatgagatgaagcatttaggtcataaaatccacgac
aaggacttgtcatcagagtctggtcagtctcaccaagaagcacctgcagttagcgagagc
agtctaaacgaaaacacctcaactcaatctgacaatgatgaaggccatgggaaacataat
caggacacagtgcacacagtattgtccatggggaagcaaggatctgcctttttgccccca
aaactagattacaatcgatcttttgcttgtcttccttatactgctgatgcttattatggt
ggggtcttgacaggatatcctccacatgccgttgcccatccccagcaaaatcatacaaca
aatgctccggttatgttgcctgctgaacctgcagaagaagagccaatttatgttaatgca
aagcaataccatgcaatccttaggaggagacagacacgtgctaaattggaggcccagaat
aagctggtgaaaggccggaagccataccttcatgagtctcgacaccgtcatgccatgaag
cgagctcgaggatcaggagggcggttcctcaacacaaagcagctccagcagacccagcag
catcaagcatcaggtggttcgagctcctcaaaggtcattggcaacagcataagctcccag
agtgaccccacccctgcaccttcaacttcaactccttcggacaccgcaagtgcttcaagg
gccaaccaggaccgcacctgctttcctgttggcttgcgccctgccatgaacttcagtgca
ccaggtggagaaggagcaaagctggttaggtga
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