Panicum virgatum (switchgrass): 120694455
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Entry
120694455 CDS
T07260
Name
(RefSeq) 40S ribosomal protein S3-2-like
KO
K02985
small subunit ribosomal protein S3e
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
120694455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pvir03011
]
120694455
Ribosome [BR:
pvir03011
]
Ribosomal proteins
Eukaryotes
Small subunit
120694455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S3_C
KH_2
Coilin_N
Motif
Other DBs
NCBI-GeneID:
120694455
NCBI-ProteinID:
XP_039833518
LinkDB
All DBs
Position
2K:complement(63741069..63744759)
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AA seq
232 aa
AA seq
DB search
MATTHAISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNV
LGEKGRRIRELTSVVQKRFNFPEGGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRA
CYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLR
QGVLGIKVKIMLDWDPKGKQGPTMPLPDLVTIHPPKEEDELLRPLAPEIPVA
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccactcacgcgatcagcaagaagcggaagttcgtggcggatggcgtgttcttc
gcggagcttaacgagatgctcacccgtgagctcgccgaggacggctactccggcgtcgag
gtccgtgtcacccccatgcgcaccgagatcataatccgcgccacccgcacccagaacgtc
ctcggcgagaagggcaggaggatcagggaactgacttctgtggttcagaagcgcttcaac
ttcccggagggcggcgtcgagctctatgccgagaaggtgaacaaccgcggcctctgcgcc
attgcccaggctgagtcactccgctacaagctcctcggtggactcgccgtcagaagggca
tgctatggtgttctacggtttgtcatggagagtggtgccaaaggctgtgaggttattgtt
agtgggaagctcagggcccaacgtgctaaatccatgaagttcaaggatggatacatgatc
tcttctggccatcctgtcaacctatatattgactcagctgtgaggcatgttctcctgaga
cagggtgtgcttggtatcaaggtaaagattatgctcgactgggatccaaagggcaagcaa
gggccaaccatgcctttacctgatcttgttacaattcaccccccaaaggaagaggatgag
ctcttgaggccccttgcaccagaaatcccagttgcttaa
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