Panicum virgatum (switchgrass): 120694481
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Entry
120694481 CDS
T07260
Name
(RefSeq) protein FAR1-RELATED SEQUENCE 5-like isoform X1
KO
K17604
zinc finger SWIM domain-containing protein 3
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120694481
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120694481
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Gene cluster
GFIT
Motif
Pfam:
FAR1
MULE
GATA
ZSWIM1-3_RNaseH-like
SWIM
Transposase_mut
Motif
Other DBs
NCBI-GeneID:
120694481
NCBI-ProteinID:
XP_039833544
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Position
2K:64029496..64033596
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AA seq
703 aa
AA seq
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MMHMLVAPDGSEMELQPYGAPPVEQELELLRDNADDGLEGHVRCLRCGISGNATPHMRRG
PDGPRTLCNACGIAYRKGKMRRMIEAEPPIDEAALAKLVPEVGMEFESEEKAYEFYNKYA
GHIGFSVRKSTSHKSSENITKVRTFVCSREGYNRDKKSLEAKKPRLDTRIGCPARLIIKV
TPECKYRVTDFKAEHNHQLAPPSTMHMLRSQRILTELQSGEAELSDDSVVTPTTKATGDL
VVRQVSFLRSISLLPADYKNYLRSKRMKTMQPGDGGAILKYLQTMQMDNPSFFYTMQIDE
DDKLTNFFWADPKSRDDFNYFGDVLCLDTTYKINGYGRPLALFLGVNHHKQTIIFGAAML
YDESFESYKWLFESFKIAMHGKQPAVALVDQSIPLSSAMAAAWPNTTQRICAWHVYQNSL
KHLNHVFQGSKTFAKDFSKCVFGYEDGDEFLYAWRSMLEKYDLRHNEWLSKVFDEKEQWA
LAYDRHIFCADIISALQAESFSSILKKFLSPQLDLVSFFKHYERAVDEHRYAELQADFQA
SQSYPRIPPAKMLKQTAHTYTPVVFEIFRKEFELFMDSVLFICGEAGTTSEYKVASSEKP
KEHFVRFDSSDCSCVCTCRKFEFMGIPCCHMLKVLDYRNIKELPQKYLLKRWRRTAKSAN
EDSEGNATNANGSSLNAPAPAANHHGLQSFSAMIQDNSISSMP
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacatgctggtggccccggatgggagcgaaatggagcttcagccgtacggcgcg
ccgccggtggagcaggagctggagctcctccgcgacaacgccgacgacggcctcgagggc
cacgtgcggtgcttgcggtgcgggatatctggcaatgcgacgccccatatgcggcgtggt
cctgatggcccgagaactctttgcaatgcgtgtggcattgcttacaggaagggcaaaatg
agaagaatgatagaagctgaacctcccatagatgaggctgcactcgcaaagcttgtccca
gaagtaggcatggaatttgagagtgaggaaaaggcatacgaattctacaacaaatatgct
gggcatattggctttagtgttagaaaaagtacatcacataaatcttctgaaaatattacc
aaagtaagaacctttgtgtgctcaagagaaggctacaacagggataaaaaatcactggaa
gcaaagaagccaagattggatacacgaattggttgcccagcgagattgattattaaagtc
acaccagagtgcaagtatagagtaactgatttcaaagcagaacacaaccatcagctggcc
cctccttcgacgatgcatatgttaaggtcgcagcggatattgacagaacttcagtctgga
gaagcagaactatcagatgattcggtagtgacaccaacaacaaaagcaactggtgatctt
gttgtcagacaagtcagttttcttcggagtatctctctccttccagctgattacaagaat
tatctccgttcaaagcgaatgaagactatgcaacctggtgatggtggagcaatattgaaa
tatctgcagacaatgcaaatggataacccctctttcttttacaccatgcagattgatgag
gatgacaagctgactaacttcttttgggcagacccaaaatcaagagatgacttcaattac
tttggtgatgtactctgcttagacacaacatacaaaataaatggatatggtaggccactt
gcattgttccttggtgtgaatcatcataaacaaacaattatttttggtgcagctatgctt
tatgatgaatcatttgaatcatacaagtggctttttgagagctttaagattgctatgcat
gggaaacagcctgctgtagctttagtagatcaatctattccattgagtagtgcaatggca
gcagcctggccaaacaccacacaacgaatttgtgcttggcatgtatatcagaattctctt
aagcacctcaaccatgtcttccaaggctcaaagacatttgcaaaggacttcagcaaatgt
gtctttggctatgaggatggagatgaattcttgtatgcttggagaagtatgcttgaaaag
tatgatcttagacataacgaatggctgtctaaagtgtttgatgagaaggagcaatgggcc
ttggcatatgataggcatatattttgtgctgacatcataagtgcacttcaagccgagagt
ttcagtagtattttgaagaagttcttgagtcctcaactggacctagtttccttcttcaag
cactatgaaagagcagtggatgaacatcgctatgctgagctgcaagctgacttccaagct
agtcagagctatccaagaatacctccggccaagatgctaaagcaaactgctcatacatat
acaccagtggtgtttgagatctttcgtaaagagtttgagctattcatggactctgtgtta
ttcatttgtggggaggccgggacaacatctgagtacaaggttgcttcatctgagaaaccc
aaggaacactttgttcgatttgattcaagtgattgctcctgtgtgtgcacttgtaggaag
tttgagtttatgggcatcccatgctgtcacatgttgaaggtgctggattacagaaatatt
aaagagctacctcaaaaatatctgctgaagcgatggaggaggacagccaaatctgcaaat
gaagacagcgaaggcaatgcaacaaatgctaatggatcatcattgaatgcccctgctcct
gctgcaaatcaccatgggcttcaaagcttcagtgcaatgattcaagacaattctatttct
agtatgccttag
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