Panicum virgatum (switchgrass): 120694488
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Entry
120694488 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120694488 isoform X1
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120694488
Membrane trafficking [BR:
pvir04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
120694488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
FYVE_2
DUF4679
Motif
Other DBs
NCBI-GeneID:
120694488
NCBI-ProteinID:
XP_039833553
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Position
2K:64091161..64094276
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AA seq
462 aa
AA seq
DB search
MGTPDEMMAYSSLSKIDTSQNQRAALSNGAAGNNYPAHDYLYEPSFEPDFPEYDSRDDPF
TPTRASTKVDLKSVLGGLVSIVTGANKSEDDASRKQSFSTDISFLGSDKNGDFDVHPSVC
VPSAPPLLEANALQYSAYREVLLADPPDWLPDSSANACLQCNLPFTALTRGRHHCRFCGG
IFCKDCSKGRCLLPMKFRIRDPQRVCDACYERLDPLQGLLINYNSNSMQPAKHDVTDWTS
TRSWLNMPVGVSMEYEIYKATNTMKKYCQVARLNPEKSIPSSILKGAKGLAILTVAKAGA
VVTYKVGTGLVVARRSDGSWSAPSAILSVGLGWGVQIGGELTDFIIVLHDRKAVKAFSSR
IHLSLGAGLSAAAGPIGRAFEADVRASEKGSGICYTYSCSKGAFVGVSLEGNVVTTRSDT
NLRFYGDAYLTTTDILFGRVERPRAAQPLYSALDDLFSRMVC
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaactccagacgaaatgatggcatactcttccctgtccaaaatcgataccagccag
aaccagagagctgctctgtccaatggagctgctggaaacaactatccagctcacgattat
ctctatgagccatcatttgaaccagacttcccagagtacgattcacgggatgacccattc
accccaacacgggctagtacaaaagttgatctgaagagtgttcttggaggactggtttca
atcgtcacgggtgcaaacaagagtgaggatgatgcatcacggaagcaaagtttcagcaca
gacatctcgtttcttggatctgacaagaatggcgatttcgatgtgcatccatccgtctgt
gttccaagtgcaccgccgctacttgaagcaaacgctttgcaatatagtgcatacagggag
gtgttgcttgcggatccaccagattggttgccagatagctctgctaatgcgtgcctgcag
tgcaacttgcctttcacagctctgactcgtggaaggcaccattgccggttctgtggaggt
atattctgcaaagattgttccaagggaaggtgtttgctgcccatgaaattcagaattcgt
gatcctcagagagtttgtgatgcttgctacgagaggctcgatccacttcagggcttattg
atcaactataatagtaactccatgcagccagcaaaacacgatgtcacggattggacaagc
actagaagctggttgaacatgcctgtcggtgtatcaatggagtatgaaatatacaaggcc
acaaacacaatgaagaaatattgtcaggttgcaaggttaaaccctgagaagtccatccca
tcatctattctcaagggagcaaagggacttgcaattctaacagttgccaaggcgggtgca
gttgtaacatacaaagttggcactggtcttgtagttgctcgcagatcagatggatcatgg
tctgccccgtcagcaattttatctgttggactgggatggggagtacagattggtggagaa
ctgacggactttatcattgtgcttcatgaccgtaaagctgttaaggcattcagcagtcgc
attcatctttctcttggggcaggattaagtgctgcagctgggccaataggcagagccttt
gaggcagatgttcgggccagtgagaaaggttctggaatatgctacacttacagctgcagc
aaaggtgcgttcgttggggtttcactggaagggaatgtcgtgacaaccagatcagacacc
aatcttcgtttctatggcgatgcttacctgaccacaactgacatcctgtttgggagagtg
gagaggccccgagccgcccagcccctgtactcagctctagacgatcttttctccagaatg
gtctgctag
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