Panicum virgatum (switchgrass): 120694494
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Entry
120694494 CDS
T07260
Name
(RefSeq) alanine aminotransferase 2-like
KO
K00814
alanine transaminase [EC:
2.6.1.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00220
Arginine biosynthesis
pvir00250
Alanine, aspartate and glutamate metabolism
pvir00710
Carbon fixation by Calvin cycle
pvir01100
Metabolic pathways
pvir01200
Carbon metabolism
pvir01210
2-Oxocarboxylic acid metabolism
pvir01230
Biosynthesis of amino acids
Module
pvir_M00171
C4-dicarboxylic acid cycle, NAD - malic enzyme type
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
120694494
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
120694494
00220 Arginine biosynthesis
120694494
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120694494
Enzymes [BR:
pvir01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.2 alanine transaminase
120694494
Amino acid related enzymes [BR:
pvir01007
]
Aminotransferase (transaminase)
Class I
120694494
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Asp_aminotransf
MinC_N
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
120694494
NCBI-ProteinID:
XP_039833561
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Position
2K:complement(64149695..64162224)
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AA seq
542 aa
AA seq
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MRRFAADRARRAVAASLRGAASSRSAAPSPLAPAPRYPAPPVGAAAMAAALARTMSTAAA
GTPPVSMDTINPKVLKCEYAVRGEIVTHAQNLQQELQKNPDSLPFDEILYCNIGNPQSLG
QQPVTYFREVLSLCDHPGLLDKSETHALYSSDAIERAWQILEKIAGRATGAYSHSQGIKG
LRDEIAAGIAARDGFHASGDNIFLTDGASPAVHMMMQLLIGSEKDGILCPIPQYPLYSAS
IALHGGSLVPYFLDEETGWGLEVDELKKQLEEARSKGITVRALVVINPGNPTGQVLAEEN
QKKIVEFCKNEGLVLLADEVYQENIYVEDKQFHSFKKVARSLGYTDDDLPLVSFHSVSKG
YYGECGKRGGYMEITGFSPEVREQIYKLASVNLCSNVSGQILASLVMNPPKAGDESFESF
MVERDGILSSLARRAKALEEAFNSLEGITCNKAEGAMYLFPRLHLPQKAIGAAHAAGTAP
DAYYAKRLLEATGIVIVPGSGFGQVPGTWHFRCTILPQEDKIPAIISSFKEFHEKFMDEF
RD
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgcgccggttcgcagccgacagggcgcgccgcgcggtggccgcgtccctgcggggcgcc
gcctcctccagatcagccgctccgtcgcccctcgctccggcgccgcgctatccagctcct
cccgtgggggcggcggcgatggcggcggccctcgccaggaccatgtccacggccgccgcg
ggaacgcccccagtgtcgatggataccatcaaccccaaggtcttgaagtgtgaatatgca
gttcgaggagagattgttacacatgctcagaacttacaacaagaattacagaaaaatcca
gattcacttccttttgatgagatactttactgcaatattgggaatccccaatcccttggc
caacagccagttacatatttcagagaagtcctctctttatgtgatcatccaggtctcttg
gacaaaagtgaaactcatgctctatacagttcagatgctatagagagagcatggcaaatt
ctggagaagatagcaggaagagcgacgggagcctatagccatagtcagggtataaaaggt
ttgcgtgatgaaattgcagctggaattgctgcccgtgatgggtttcatgccagcggagac
aacatcttcctaacagatggagcaagcccagcagtgcacatgatgatgcaattgttgata
gggtctgagaaggatggcattctctgccctattccacagtacccactgtattctgcatcg
attgctcttcatgggggttcccttgttccttatttccttgatgaagagacagggtgggga
cttgaggttgatgagctaaagaaacaactggaggaggctcgatctaagggcatcactgtc
agggcacttgttgtcataaatcctggaaatccaacgggacaggttcttgctgaggaaaac
caaaagaaaattgtcgaattctgcaagaatgaagggcttgttcttcttgcagatgaggtt
taccaagaaaatatatatgttgaagataagcaattccactcattcaaaaaagttgcacga
tcattgggatacactgatgacgatcttcccttggtatcattccattcggtttctaaaggc
tactatggagaatgtggaaaacgaggtggttacatggagataactggattcagtcctgaa
gtacgggaacagatttacaagttggcatcagtaaatctgtgctccaatgtctcaggccaa
atacttgctagtcttgtaatgaacccaccaaaggctggggatgaatcctttgaatcattc
atggtagagagggatggtatcctttcatcattggctcgccgtgcaaaggctttggaagaa
gcattcaatagtttagaaggtatcacatgcaacaaagccgagggtgcaatgtatctgttc
ccacgccttcatttgccccagaaggcaattggagctgcccacgcagctggcactgcccca
gatgcatactacgccaaacgccttctagaagccactggaattgtcattgtccctggttct
ggttttggacaggtccctggaacatggcacttcagatgcacgatcttgccgcaggaggac
aaaataccagcaatcatatctagtttcaaggagtttcacgagaagttcatggatgagttc
cgtgattaa
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