Panicum virgatum (switchgrass): 120694640
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Entry
120694640 CDS
T07260
Name
(RefSeq) novel plant SNARE 13-like
KO
K08494
novel plant SNARE
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120694640
Membrane trafficking [BR:
pvir04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
120694640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
Occludin_ELL
MCPsignal
Tox-PLDMTX
DNA_repr_REX1B
Hydro_N_hd
DUF6988
RGS_DHEX
ABC2_membrane_3
CAP_N
TMPIT
YkyA
Motif
Other DBs
NCBI-GeneID:
120694640
NCBI-ProteinID:
XP_039833758
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All DBs
Position
2K:65437262..65441346
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AA seq
266 aa
AA seq
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MASDVPMSPELEQVDGEIQDIFRALQNGFQKMDKIKDSNRQSKQLEDLTGKMRECKRLIK
EFDRILKDEEKNNPPDVNKQLNDKKQFMIKELNSYVTLRKTYQSSLGNKRIELFDTGNDQ
VAEDTPAQMASEMSNQELISAGRKQMDQTDQAIERSKMVVAQTVEVGAQTAANLAQQTEQ
MKRIGNELDSVHFSLKKASQMVKEIGRQVATDKCIMAFLFLIVCGVIAIIVVKIVNPHNK
SIRDIPGLAPPAMNRKLLSIDPFGGL
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgacgtgcccatgagccccgagctcgagcaggtggacggcgagatccaggac
atcttccgcgccctccaaaatgggttccagaagatggacaagatcaaggactccaacagg
cagtccaagcagctggaagatctcaccgggaagatgagggagtgcaagcgcttaatcaag
gaatttgatcgcatactcaaagatgaggagaaaaataaccctcctgacgtcaacaagcag
ctaaatgacaagaagcagttcatgatcaaagagttgaattcctatgtcaccttgaggaaa
acgtaccaaagtagccttggtaataagaggattgagttattcgatactggtaacgatcaa
gtggctgaggacacaccagctcaaatggcatcagaaatgtcaaatcaagagctcattagc
gctggaaggaaacaaatggaccaaactgaccaagctattgagcgttcaaaaatggttgta
gcacaaactgttgaagttggagctcaaactgctgcaaatctggcacagcaaacagaacaa
atgaagaggatcggcaatgagcttgactctgttcacttctccctgaagaaagctagtcaa
atggtgaaagagattggtcgtcaggttgcaactgacaagtgcattatggcgttcctgttt
ctgattgtctgtggtgttattgcaataattgttgttaagattgtcaacccgcacaacaag
agcatcagagacatcccgggcctggcacctcctgctatgaacaggaagctgctctccatc
gaccctttcggaggactctga
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