Panicum virgatum (switchgrass): 120694712
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Entry
120694712 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 1-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120694712
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120694712
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GFIT
Motif
Pfam:
MATH_2
BACK_BPM_SPOP
BTB
TRAF-mep_MATH
MATH
BACK
Motif
Other DBs
NCBI-GeneID:
120694712
NCBI-ProteinID:
XP_039833855
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Position
2K:complement(66107256..66111583)
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AA seq
425 aa
AA seq
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MGAGRVCRGGPSSSPAGATAGRPFPPLAASSSSASPSSAPSETASTSVTKTVNGSHHFKI
AGYSLSKGIGVGKYIASESFSVGGFDWAIYFYPDGKSAEDGAAYVSLFIALASEGTDVRA
LFELTLVDQSGKGQDKVHTHFGRSLESGPYTLKYRGSMWGYKRFFKRSALETSDYLKDDC
LLVNCTVGVVQSHTEGPKIYTIPVPPSNMSQHIGQLLTGGKRTDITFEVDGEMFPAHKVV
LSARSPVFRAQLFGPMKDKNMKCIKIEDMEAPVFKALLHFMYWDELPDIEELTGVNTTWV
STLMAQHLLAAADRYALERLKLLCELKLCEDVAINTVANTLALAEQHHCYQLKTVCLKFV
ALPENLKAVMQTDGFDYLQQSCPSLLTELLEYVAKVGEHSVTPCLYSTEVLDGGDANGRR
VKPRI
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccggccgtgtctgccgcggcggcccgtcctcctcccccgccggggccaccgcg
gggcggccgttcccgccgctcgccgcatcctcctcctccgcctccccttcgtcggccccc
tccgagacggcgtccacgtcggtcaccaagaccgtcaacgggtcgcaccacttcaagatt
gccggctactccctctccaaggggatcggggtcgggaagtacatcgcctccgagtccttc
tccgtggggggattcgactgggcgatctacttctaccccgacgggaagagcgcggaggac
ggcgccgcctacgtctcgctcttcatagccctcgccagcgagggcacggatgtgcgcgcg
ctcttcgagctcacgctcgtcgatcagagcggcaaggggcaagacaaggtgcacacccac
tttgggaggtcgctcgagagcggcccttacaccctcaagtaccgcggaagcatgtggggc
tacaaacgtttcttcaaacggtctgccctagaaacatcagactatcttaaagatgattgc
cttttagtgaactgcactgttggtgttgtgcaatcacatactgaaggaccaaagatatac
acaatacctgtaccgccatccaacatgtctcaacatattggtcagctactgacaggtgga
aagagaaccgacattacatttgaagttgatggcgagatgtttcctgcccacaaggttgtt
ctttcggctcggtctccagtttttagggcacaactttttggtcctatgaaggataagaat
atgaagtgcattaagattgaagacatggaggctccagtattcaaggctttgctccatttc
atgtactgggatgagttgccggatattgaagaacttactggtgtaaatacaacttgggta
tccaccttgatggctcagcatttgcttgctgctgcggaccgttatgcattggagagatta
aagttgctctgtgaacttaagctgtgtgaagatgttgcaataaacacagttgcaaacact
ttggcgctggctgaacagcaccactgttatcagctaaaaactgtttgcttgaaattcgta
gctctgcctgagaatttgaaagctgtcatgcaaaccgatgggtttgattatttgcagcaa
agctgcccgtcccttctgaccgagcttcttgagtatgtggccaaggtaggagagcactct
gtcactccctgcttgtattcaactgaagtccttgatggtggcgatgccaatggaagacgt
gtgaaaccaagaatctaa
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