Panicum virgatum (switchgrass): 120694761
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Entry
120694761 CDS
T07260
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24-like isoform X1
KO
K11841
ubiquitin carboxyl-terminal hydrolase 10 [EC:
3.4.19.12
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120694761
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120694761
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120694761
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120694761
Ubiquitin system [BR:
pvir04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120694761
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Vasculin
Motif
Other DBs
NCBI-GeneID:
120694761
NCBI-ProteinID:
XP_039833954
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Position
2K:66674485..66679326
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AA seq
567 aa
AA seq
DB search
MSGGGSGSSDKMLLFGSFTEDETKLFQGQPLKSPTKSATKSWEHPEIQFGSLNFSVLSLQ
KSSSPIAKGVVLPAKSADAQSSVITKENACSNKKEAVGSSFPNGGPVLANGCTPVNVFPN
NGIFENVRKTEAVVPPAMPVVAPVVTAKSISNAVPHAVSEVDKDTTKPTQNRKLNKEKEI
TENGSPVVDTPIVAASADEAVTSLNKKASQNMPLLPHGLRNTGNICFLNATLQALLSCPP
FVHLLQDLRNRSIPKVGYPTLSAFVEFLSQFDVHDESIMKKNEKAVTVAAKPLNPAMFDT
VLRNFTPDVPAGTSARPRQEDAQEFLSFAMNRMHDELLKLNGNGSNSKEGMVVSSADDDA
WETVGRKNKSVIVRTQSFVPSELSAIFGGQLQSVVKAQGNKASATVEPFLLLHLDIFPDA
VQTLNDALHLFSAPESLEGYRTAAGKAGVVTARKSFKIQTLSKIMILHLKRFSYGNHGST
KLYKPLHFPLQLVLSRDLLSLPMSEGRKYELVATITHHGRDPYRGHYTAHAKHANGQWLR
FDDDAVVPVGQNEVLHDQAYILFYQQV
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcggcggcagcggcagcagcgacaagatgctgctgttcgggtcctttacagag
gatgagacgaagttgttccagggtcagcctctcaaaagtccgactaaaagtgcgaccaaa
tcatgggaacatccagagatccagtttggctcgctgaacttttcagtcctcagtctacag
aaatcatcaagtcctattgctaaaggtgttgttcttcctgcaaaatcagcagatgctcag
agcagtgtcattacaaaggagaatgcatgcagtaataaaaaggaagctgtaggatctagc
tttccaaatggtggaccagttctggctaatggatgcacccctgtgaatgtttttcctaac
aatggtatattcgagaatgtgagaaagacggaggctgttgttcctccagctatgcctgtt
gttgctccagttgttactgccaaaagcatcagcaatgcagtaccacatgcagtgtcagag
gtggacaaggacactaccaaacccactcaaaacagaaagttaaataaggaaaaggaaata
actgaaaatggaagcccagttgttgatacacctattgttgcagcttcagcagatgaggcg
gtcacaagcttaaacaagaaagcctctcaaaacatgcccttgcttcctcatggtttgagg
aacacaggaaatatttgcttcttgaacgcaactttgcaggcgttgctttcatgcccgcct
tttgtccaccttttacaggatttgagaaaccgaagtatacctaaggttggctacccaact
ctgagtgcatttgttgagttcctctctcaatttgatgtgcatgacgaatcaattatgaag
aaaaatgagaaggctgttacagttgctgcaaaaccacttaatcctgccatgttcgatact
gttctcagaaactttactccagatgtgccggctggaacatctgctcggccaaggcaagaa
gatgctcaagagtttttaagttttgccatgaatagaatgcatgatgaactgctgaagctt
aatggcaatggttcgaattcaaaggagggtatggttgtttcttctgctgatgatgatgct
tgggagactgttggtcgaaagaacaaatctgtaatagttagaactcagagttttgttcca
tctgaactaagtgctatttttgggggtcaactacagagtgttgtgaaagcacaaggtaac
aaagcatcagctacagttgagcccttcctacttctccatcttgatatattcccagatgct
gttcagacactgaacgatgcacttcatcttttctctgctcctgagtctttagaaggatac
agaacagctgctggaaaggctggtgtggtgacggctagaaaatcattcaagatacagacg
ctttcaaagataatgatactgcacttgaagaggttcagttatggaaatcatgggagcact
aaactttacaagccactccacttccctctccagctggttcttagtcgtgatctgctgagc
ttgccgatgtcagagggtagaaaatatgaacttgttgcgaccatcactcatcatgggagg
gacccatacagggggcactacactgctcatgcaaagcatgccaatggccagtggcttcgg
tttgacgatgatgccgtcgtccctgtgggccagaacgaggtcttgcatgaccaagcatat
atcctgttctaccagcaagtctga
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