Panicum virgatum (switchgrass): 120694766
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Entry
120694766 CDS
T07260
Name
(RefSeq) E3 ubiquitin-protein ligase AIRP2-like
KO
K25840
E3 ubiquitin-protein ligase AIRP2 [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120694766
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120694766
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120694766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
zf-C3HC4
Prok-RING_4
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_4
zf-RING_10
ADD_DNMT3
zf-UDP
zf-C3HC4_4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
120694766
NCBI-ProteinID:
XP_039833958
LinkDB
All DBs
Position
2K:complement(66760393..66764651)
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AA seq
242 aa
AA seq
DB search
MGRSFRDSLKVLEADIQHANSLASEFRREYDGATLQMRMAYCPAAHFFLFLVQWTDCSLA
GALGLLRILIYKVYADGTTTMSTHERKASIREFYAVIFPSLMQLHEGINEVEDKKQKAIC
VERYKKRDEDPKMVISEIDDNIEEECGICMEINTKVVLPTCSHAMCIKCYRDWRSRSQSC
PFCRDSLKRVNSADLWIYTDNRDIVDMATVRRENLRRLFMYIDKLPTVIPESVFDVYDSH
VK
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggtcgttcagggactcgctcaaggtgctcgaggccgacatccagcacgccaac
tcgcttgcatctgaatttcggagggaatatgatggtgccacccttcaaatgaggatggca
tattgccctgctgcccattttttcctttttcttgtgcagtggacagattgcagccttgct
ggtgcacttgggctgttgaggattctaatttataaggtttatgctgatggaacaaccacc
atgtctactcatgaaagaaaagcaagcatcagggaattctatgctgtcatatttccttct
ttgatgcaactacatgaaggaatcaatgaagtagaggataagaaacagaaagcaatatgt
gtagagaggtataaaaaacgagatgaggatccgaaaatggtcatatcagagattgatgat
aatatagaggaggaatgtggcatatgtatggagataaacaccaaagttgttcttccaact
tgtagccatgcaatgtgcattaaatgctatcgtgactggaggtcaagatcccagtcctgt
ccgttctgccgcgacagcctcaagagggtaaactctgctgacctatggatatacacggat
aacagggacatcgtcgacatggcgacggtccgaagagagaacctgaggcgactcttcatg
tacatagacaagttgcccactgtcatcccagaatctgtctttgacgtctacgactcccat
gtgaagtga
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integrated database retrieval system
