Panicum virgatum (switchgrass): 120694774
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Entry
120694774 CDS
T07260
Name
(RefSeq) 4-alpha-glucanotransferase DPE2
KO
K00705
4-alpha-glucanotransferase [EC:
2.4.1.25
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120694774
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.25 4-alpha-glucanotransferase
120694774
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_77
CBM_20
Motif
Other DBs
NCBI-GeneID:
120694774
NCBI-ProteinID:
XP_039833970
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Position
2K:66817213..66826554
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AA seq
950 aa
AA seq
DB search
MASSGPTSGKKSLNTVTLLFKLPYYTQWGQSLLIAGSEPALGSWNVKQGLSLSPVHQDNE
LIWCGRVSVAAGFTCEYKYYVVDDNKNVLRWEAGENRKLVLPDGVQEGDIIEIRDWWQDA
SEALFLRSAFKNVVFNATEGVKKEPQSASLNKSLDPEDIVIQFVISCPRLESGSTVVVTG
SNPQLGRWQAQDGLKLSYVGDSLWKAICVLRKSEFPVKYKYCQISQAGNSSLELGPNREV
DIDLSSPKQSRYVVLSDGALRDAPWRGAGVAVPVFSIRSDEDLGVGEFLDLKLLVDWAVN
SGFHLVQLLPINDTSVNGMWWDSYPYSSLSVFALHPLYLRVQALSDAIPADVKEEIQQAK
KQLDKKDVDYEAALSTKLSIARKIFNLEKDKVLNSSSFKQFLSENEEWLKPYAAFCFLRD
FFETSDHSQWGRFSQFSKEKLEKLISEGTLHHDVIRFHYYVQYHLYMQLSDAAAYARKKK
VILKGDLPIGVDRNSVDTWVYPTLFRMNTATGAPPDYFDKNGQNWGFPTYNWEEMSKDNY
GWWRARLTQMAKYFTAYRIDHILGFFRIWELPDHAATGLLGKFRPSIPLSQEEFLSEGLW
DFNRMSRPYIRQEILEEKFRSFWTVIAANFLNEYQKQCYEFKEDCNTEKKIIAKIKTSPE
KSLWLEKEDSIRRGLFDLLQNIVLIRDPEDSTKFYPRFNLEDTSSFRDLDEHSKNVLRRL
YYDYYFARQENLWRQNALKTLPVLLNSSDMLACGEDLGLIPACVHPVMQELGLIGLRIQR
MPSEPNTEFGIPSQYSYMTVCAPSCHDCSTLRAWWEEDEGRRSRFYKTVVGSDEEPPSRC
TPEVVHFIVQQHFDAPSMWAIFPLQDLLALKDKYTSRPAPEETINDPTNPRHYWRFRVHV
TLESLLDDKDIQATIKDLVTSSGRSFPGKKVEGADESGEKLSKVQLNGKA
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctcggggccaacgtctgggaagaaatctctaaatacggtgactttgctgttc
aaattaccatattacacacaatgggggcagagccttctgattgctggctcggaaccggca
ctgggttcgtggaatgtcaagcaaggactgtctctgagtccagttcatcaggataatgag
ctaatctggtgtggaagagtgtctgttgctgctggcttcacctgtgaatacaaatactat
gtagtggatgacaacaagaacgttttgagatgggaggctggggagaacaggaaactagtc
ctgccagatggcgttcaagaaggagacataattgaaatccgtgactggtggcaggatgct
tctgaagcccttttccttagaagcgcgttcaagaatgttgttttcaatgctacagaaggt
gttaaaaaggaaccccagtctgcatccctcaacaaaagtttggatcctgaagatatcgtt
atccagttcgtaattagctgtcctcgactcgaatctggctctactgttgtcgtcactgga
agtaatcctcagttaggaagatggcaagctcaagatggtctcaagctgagctatgttgga
gattccttgtggaaagcaatctgtgttttgcggaagtctgagttccctgtaaaatacaaa
tactgtcaaatcagtcaagcaggaaactcttcattggagctaggtccaaacagagaggtt
gatatcgatttatcatctccaaagcaatccagatatgtcgtgttatctgatggtgccctc
agggatgcaccatggaggggtgcaggtgttgctgtacccgtgttttcaatcagatcagac
gaggaccttggtgttggagaatttctagatcttaaacttcttgttgactgggcagtcaat
tcaggtttccatcttgttcagctccttccgatcaatgatacttcagttaacgggatgtgg
tgggattcttatccatacagctcgctctctgtattcgcgttgcaccccttgtacctgaga
gtacaagcactttcagatgcgattccagcggatgttaaggaagagattcagcaggcaaag
aagcaattggataaaaaggatgttgactatgaggcagcattgtccacaaaattgtcgatt
gctaggaaaatattcaatttagaaaaggacaaagtgctaaactccagttctttcaagcag
tttttatctgaaaatgaggaatggttgaaaccatatgcggcattttgctttttgcgggac
tttttcgagacatctgatcacagccaatggggtcggttttctcagttttccaaggaaaag
cttgagaagcttatttctgaaggtactttgcaccatgacgttatccgttttcattactat
gttcagtaccatctatatatgcaactatcagatgcagctgcatatgcaagaaagaaaaag
gttatcctgaaaggtgatttacctattggcgttgacaggaatagtgtggatacttgggta
tacccaactttatttcgcatgaatactgctactggagcacctcctgattattttgacaag
aatggtcaaaattggggttttcctacgtataactgggaggagatgtcaaaggataattat
gggtggtggcgagctcgtctgacacagatggcaaagtacttcacagcatacaggatagac
cacatcttgggtttctttagaatatgggagcttccagatcatgctgcaacaggtttatta
gggaaatttagaccttcaattcctcttagtcaggaggagtttctaagtgaaggactatgg
gatttcaatagaatgagtcgaccatacattcgtcaggaaattctggaggagaagttcaga
tccttttggacagtcattgcagccaactttctaaatgagtatcagaaacagtgttatgag
tttaaagaagattgcaacacagagaaaaagattatcgcaaagattaaaacaagtcctgaa
aaatcactgtggctagagaaagaagacagtatccgtcgtggtctttttgatttactacag
aatattgttcttatcagggatccagaggactccacaaaattttatcctcgtttcaacctg
gaagatacttcaagttttagggaccttgatgaacacagcaaaaatgtcctcagaagattg
tactatgactattattttgctcgccaagaaaatctctggcgtcaaaatgcactgaagact
ctgcctgtcctgttgaactcgtcggatatgttggcatgtggagaagaccttggtcttatc
cctgcttgtgttcaccctgttatgcaagaacttgggttgattggactgcgtatccaaaga
atgcctagtgaaccaaacacggaatttggtattccttctcaatacagctatatgacggtt
tgtgctccctcatgtcatgattgctctacattacgtgcttggtgggaagaagacgaagga
agaagaagtcgtttctacaagactgtagttggcagtgatgaagagcccccatctcgctgc
accccagaagtagttcacttcattgttcagcagcattttgatgctccatcaatgtgggca
atctttccacttcaggaccttctcgcactgaaagacaagtacacctcaagaccagcacca
gaggaaacaatcaatgaccccactaacccaaggcactattggagattccgtgtccatgtg
acattggagtctctgttggatgacaaggacatccaagcaaccattaaggaccttgtcaca
agtagcgggagatccttccctggaaagaaggtggaaggtgccgacgaaagcggagagaag
ctatctaaggtgcagttgaatggtaaagcttag
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