Panicum virgatum (switchgrass): 120694868
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Entry
120694868 CDS
T07260
Name
(RefSeq) probable galacturonosyltransferase 7 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120694868
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120694868
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120694868
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120694868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
MetW
Motif
Other DBs
NCBI-GeneID:
120694868
NCBI-ProteinID:
XP_039834111
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Position
2K:67735311..67740335
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AA seq
638 aa
AA seq
DB search
MKAQPLLPAALKRRRGPRVAVLALVFCSLLVPFAFLFDRAPSSGYVTTEERHRQEVVLPS
LDHVVKRDRPGANSERRLDAPEKKIPISSDQNIPEKRISKGSAGVIDQHKQIDSHSRSGG
AKPKVLPAPKVEPSKAVAESTRETREISKDVQGQQKVAKADEVEKAKACQLEFGSYCLWS
IEHKEVMKDSIVKRLKDQLFVARSYYPSIAKLQGYEALTQEMKQNIQEHERVLSVSTVDA
DLPSFINKRMEQMERTIARSKSCTVDCKNVDRKLRQILDMTEDEAHFHMKQSAFLYNLGA
QTLQKSHHCLNMRLTLEYFKSSSFDSDDSPSGKFSSPKYMHYVILSKNVLAASVVINSTV
SSCKDPGNLAFHILTDAQNFYAMKHWFARNSYKNAVIHVLNYEAIILEKLPKDNIQQLYL
PEEFRVLIRSIKQPTENTRMEYLSLFSHSHFLIPEIFKYLNKVVLLDDDVVVQRDLSFLW
NIDMGDKVNGAVKFCGLKLGQMRNVLGKTAYDPKSCAWMSGVNLINLDKWREHNVTENYL
LLMKKFKFKDERSLQAAAIPLSLLSFQHLIYPLDEKLTLAGLGYDYGIDEEVAQRAASLH
YNGNMKPWLELGIPDYKKYWRRFLVRGDRFMDECNVNP
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgcagccgctgctgccggcggcgctcaagaggcggaggggaccgcgcgtggcg
gtgctggcgctcgtcttctgctccctgctcgtgcccttcgccttcctcttcgaccgcgcc
ccctcctctgggtacgtgacgacggaggagcggcaccgacaggaggtcgttctgccttcg
ttggatcacgtggtgaagagggatcgtcctggcgctaacagcgaacggagactggatgca
ccagaaaagaagatccccataagcagtgatcagaatataccagagaagaggatctccaaa
ggtagtgcaggagtcattgatcagcataagcaaattgatagccactcaagaagtggtggt
gctaaaccaaaagttcttccagcaccaaaagttgaaccgtcaaaggctgtggcagaatca
actcgagagacaagagagattagcaaagatgtacaagggcaacaaaaagttgcaaaagct
gatgaagtggaaaaggcgaaggcttgtcaacttgaatttggaagttactgtctctggtcc
atagagcacaaagaagtaatgaaagattctatagtgaagaggctaaaagaccaactcttt
gtagcacgctcatactatccaagtattgcaaaacttcaaggatatgaagctctgactcag
gaaatgaagcaaaacatacaagaacatgagagggtgcttagtgtatcaacagtcgatgct
gatctaccatcctttatcaacaagaggatggagcagatggagcgaacaattgcgagatcc
aaatcttgcacggtggactgtaagaatgttgacaggaagcttcgccagatacttgatatg
actgaggatgaagctcattttcatatgaagcagagtgcgttcctctacaaccttggtgcc
cagacattacagaaaagtcatcattgccttaatatgaggttgacgttagagtatttcaaa
tcatcttcgtttgattcagatgattctccttctggcaagttcagtagtccaaaatatatg
cactatgttatactatctaagaacgttcttgcggcttctgtagtgatcaactcaactgtg
agcagttgcaaggatccaggcaatcttgcttttcatatactaactgatgctcagaacttc
tatgccatgaaacactggtttgccaggaattcttataaaaatgcagttatccatgttcta
aactatgaagccattattttggagaagctgccaaaggataatatccagcagctgtacttg
ccagaggagttccgtgttctcattaggagcattaaacagcctactgagaacacaagaatg
gaatacctgtcactgttcagccattcacatttccttattccagaaatattcaagtatcta
aataaggtggttctgttggatgatgatgtagttgttcaacgtgatctttctttcttgtgg
aatattgatatgggagacaaggttaatggtgctgtcaaattttgtggtctgaaacttggt
caaatgagaaatgtgctgggcaaaacagcatatgatcccaagtcatgtgcatggatgtca
ggggtgaatttgattaatttggataaatggagggaacataatgttacagagaactatctg
ctgctcatgaaaaagttcaaattcaaggatgagcgatctttgcaagcagcagcaattcct
ctaagcttgctatccttccaacatctcatctatcccctagatgaaaaattaaccctggct
ggacttggatatgactatggaattgatgaagaggttgctcagagagccgcatcgttgcac
tacaatggcaacatgaaaccttggcttgaactaggtataccggactacaaaaagtactgg
aggagatttcttgttcgaggagaccgatttatggacgagtgcaatgtaaatccttga
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