Panicum virgatum (switchgrass): 120694897
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Entry
120694897 CDS
T07260
Name
(RefSeq) importin subunit alpha-1a-like isoform X1
KO
K15042
importin subunit alpha-6/7
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120694897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120694897
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120694897
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_EZ
HEAT_2
Arm_3
ARM_ARMC5
IBB
HEAT
RICTOR_V
Proteasom_PSMB
ELMO_ARM
Motif
Other DBs
NCBI-GeneID:
120694897
NCBI-ProteinID:
XP_039834145
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All DBs
Position
2K:68013898..68024121
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AA seq
564 aa
AA seq
DB search
MPRAPRRPSDEARRGAYKPRVDFSRSRRRREDGLLALRRLDRDAGLFKRRHDETAPAIHA
SDPAPTSDEEAPPAYNARPPPGSPSPPDPSAPRNRNAAESELEGLSELVDKVCSDDTTSQ
LEATVQFRKLLSDEKNSTVIRIIRADVLPRFAEFLSRHGLPQLQMEAAWVLTNIAASDYT
LLVAECGAVPRLVELLGSPNANIRHQAIWCLGNIAADLPSCRDILFDHGVVTPLLSQFRD
DMKIPVLRTAMWALSNICFGKLPAEVQVKPILDIVCQLIHSADEKILADACWTVYYICSG
VDDAIQDVLDAGVCPQLVNLLMHASASVLLPVIMALARISAGDDAQVQVLIENGILNCLA
QLLARNYPKNIKKQACLIVSNIATGNKEQIQAVIDASIISPLVVLLKTSESDIKKEAAWA
LSNAASSASSEQIQYLVSRGCLEPLCSVLSYQDHDLLYTCLEGLENILQAGEVGKKGEES
GTNPYAQFILECGGLDKLEDLQDVNSDRVYELVMKLLQSYWEEEASENDDPDVPGSNDSA
DTVGTKPEEAAQPPEPASGADEAE
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcgccccgcgccggccgtccgacgaggcgcgccgcggggcctacaagccgcgt
gttgacttcagccgctcgcgccgccgccgcgaggacggcctcctcgccctccgccgcctc
gatcgcgacgccggcctcttcaagcgccgccacgacgaaaccgctcccgccatccacgcc
tccgatccagctcctacatccgacgaagaagccccacccgcatacaacgctcgtcctcca
cccggttctccctcgccgccggacccatcggctccccggaaccggaatgccgccgagtca
gagcttgaaggcctgtcagaattggtcgacaaagtatgttcagatgacaccaccagtcag
ctggaagccacagtccagttcaggaaacttctttcagatgagaagaattcaactgtgata
agaatcattagagcggacgtccttcccagatttgctgagtttctttcaagacatgggctt
cctcagctccaaatggaggcggcctgggtgcttaccaacatagctgcatctgattataca
ctgctggttgcagaatgtggtgctgttccaaggttggtcgaactattagggtcaccaaat
gcgaacatcaggcatcaggctatatggtgtcttggcaatatagctgcagacttgcctagc
tgcagagacattctttttgaccatggtgttgttacgccattactttctcaatttagagac
gacatgaaaattccagttctgagaactgctatgtgggccctgtcaaatatttgttttgga
aaattgccagctgaagtgcaagtgaagccgatactggacattgtttgccagctgattcat
tctgctgatgagaagatactggcagatgcatgctggactgtatactatatatgtagtggt
gtagatgatgccattcaagatgtattagatgctggggtctgccctcaacttgtaaatctc
ttgatgcatgcatcagctagtgttcttcttcctgtcattatggcactcgcaagaatttct
gccggagatgatgctcaagttcaggtcttaatagaaaatggcattctcaattgtttagcc
caattgctcgcgcgaaattacccaaagaacatcaagaaacaagcttgtttaattgtttct
aatatcgccactggcaacaaggaacaaattcaggccgtaattgatgcaagcattattagt
cctcttgttgtcctcctaaagacatcagagtcagatataaaaaaggaagctgcttgggct
ttatcaaatgctgcgtccagtgcttcaagtgaacaaattcaatatttggtgagccgggga
tgtctagagcccctctgcagtgtcctctcctaccaagatcacgacctattatatacgtgc
ctggaaggtctcgagaacatactccaggcaggcgaggtggggaagaagggcgaggaatct
gggacaaacccgtatgcacagttcattctagagtgtgggggtttagataagctggaggat
ctgcaggacgtcaacagcgacagggtctacgagttggtcatgaagctgttgcagagttac
tgggaggaagaagcgagcgagaacgatgatccggatgtcccaggttcaaatgactcagca
gataccgtgggaactaaacctgaagaagctgcacagccaccagaacctgcttccggcgca
gatgaagccgaatga
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