Panicum virgatum (switchgrass): 120694907
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Entry
120694907 CDS
T07260
Name
(RefSeq) RINT1-like protein MAG2L
KO
K20474
RAD50-interacting protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120694907
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
120694907
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
TetR_C_40
Motif
Other DBs
NCBI-GeneID:
120694907
NCBI-ProteinID:
XP_039834163
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All DBs
Position
2K:complement(68082730..68086709)
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AA seq
805 aa
AA seq
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MSTPPPATLRGFLDAHFASPDDLAAAPALAQLLRRECAELDASLRRIEAQLRAAAASWLA
RSAGGRSDLRRIRFRSTGGAVDAEDDDGAETVRKLGLPALVREIQRIHTIRLYAEATLQL
EALVGNLEDVAFSIVRQASKLNLSSILRKSNEAELKHAKLLTAVNAVRDIERELVRVSTS
RPKWTSLIMAVDSRVEKTLAILRPQALTDYRALLAALGWPPSLSSPDTENDNYSQIPNPL
VLMNEENKEKYSQSFLALCALQHVQANREVRQCQAAAATPALADSKHFDKTACLDNGLWA
IDELVHPVASRMEYHFAKWSEQPEFIFTLVYKITKDFMDGVDDILQPLIDHARLAGLSAK
ESWVTGMVKMLVGYLERQIFPALATSNQDQTTAAKPEVESSWMHFNDLMISFDKRMQLLA
DSGIQKIASLSEGLSRSLSVFSIYNEHPDWLQIWASVELSSAQDKLKSEMEDETSWSCSD
SQHDQLGHMENSIKFLLSTREDYKAPPVSEFVVKTALSMSERGRALPNRGMQIHYNRSSS
VKFLNDFFLVLRDRCEALQLSNTALEDQSLSKASCAINAARYCENVLREWDEDTTFLDMG
PQGSLFTDEISFLVKLGTNYLEQILSAILLEFEDLSWEYVQNIGSWSGQTAVDDQILDEE
NAGVSLGFIACLDVLTDRTTKLKQYLNSKDFLDLWRSIAEGLDYFIYSSIRWGELNFSDT
GVIQLRVDTKALLHIFRPFCSRPEAFLPFLSESLRLLTMKESDAHYLLEMLTDDTRSNNC
LKHQGLHHVNAGQAAKILRSRKFGG
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccccgccgccggccaccctgcgcggcttcctcgacgcgcatttcgcctccccc
gacgaccttgccgccgccccggcgctcgcccagcttctgcgccgcgagtgcgccgagctc
gacgcctccctccgccgcatcgaggcgcagctccgtgccgccgcagcgtcctggctcgca
cgctccgccgggggccgctccgacctccgccgcatccgcttccgctcaacaggcggagcc
gtcgacgcggaggacgacgacggcgcggagacggtgcgcaagctcggcctgcccgcgctc
gtgcgggagatccaacggatccacaccattcgactctacgcggaagctactctacagttg
gaagctttggttggcaacctggaagatgtggcattttccatcgttagacaggcctcaaag
ttgaacctgtcatccatacttagaaaatcaaatgaagcagaattgaagcatgcaaagttg
ctcaccgctgtcaatgctgtgagggacattgagcgagaattggtaagggtcagcacgagt
aggccaaagtggaccagccttatcatggcagttgattctagagtggagaaaactctagcc
atcttgaggcctcaagcactcacggattatcgggctctacttgcagcgctgggttggcca
ccttctttgtcctcaccagacacagagaatgataactactcccaaatcccaaatcctcta
gtcctgatgaatgaggaaaataaagagaaatattcacaaagcttcctagcactgtgcgcc
ctgcaacatgtacaagcaaaccgtgaagtgcgccaatgccaagcagcagcagcaactcct
gccctggcagattcaaagcactttgataaaactgcttgcttggataatggactttgggca
attgatgaattagttcaccctgttgcttcaaggatggaatatcattttgcaaaatggtct
gagcagccagagttcatttttacccttgtttacaagataacaaaggatttcatggatggg
gtggatgatatattgcagcctctgattgatcatgcaaggctagcaggcttaagtgccaaa
gaatcttgggtgacaggaatggtgaaaatgcttgtaggatacctggagaggcaaattttc
ccagcacttgccacctctaatcaggatcagactactgctgccaaacctgaagtggagtcc
tcttggatgcacttcaatgacctaatgatttcttttgataaaagaatgcagcttctggca
gattcaggaattcagaaaattgcatctctttctgaaggtctgtctaggtcattgtctgtc
ttttcaatatataatgaacaccctgattggcttcagatatgggctagtgtcgagcttagt
tcagcacaggataaattgaaatctgaaatggaggatgagacaagttggtcatgtagtgat
agtcagcatgaccagcttggtcacatggaaaactcaattaagtttcttctctctacaaga
gaagactacaaagctccaccagtttctgaatttgttgtcaaaactgctttgtcaatgagt
gaaagaggtcgtgctctgccaaataggggaatgcagatccactataacagatcctcttca
gtcaagttcctgaatgatttttttcttgtcttgcgtgatcgttgtgaggcattgcaattg
tcaaatacggctttagaagatcagtctctatcaaaagcttcatgtgcaattaacgctgca
cggtactgtgaaaatgtgcttcgggaatgggatgaagataccaccttcttggatatgggt
cctcaagggtccctgtttacagatgaaatcagctttttggttaaattagggaccaattat
ctggaacagatactgtctgccattctgcttgaatttgaagatctgtcatgggaatatgtc
cagaacattggatcatggagtgggcaaactgctgtagatgatcagatcctagatgaagaa
aacgcaggagtatctcttggttttattgcctgtctagatgttctgacagacaggaccacc
aaactgaagcaatatcttaattccaaggatttccttgatctttggaggagtatagcagaa
ggccttgattacttcatctacagcagcatacggtggggtgaactaaatttctctgacaca
ggagtaattcagttaagagttgacacaaaagccctgctccacatctttaggcccttctgt
tcaagacctgaagcttttctccctttcctaagtgaatccctgaggttgttaaccatgaag
gagtcagatgcacattacctgctggagatgctaacagatgacacgaggagtaacaactgc
ttaaagcatcaaggattgcaccatgtaaatgctggacaggctgcgaagatcttaagaagc
cggaagtttggtggataa
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