Panicum virgatum (switchgrass): 120694931
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Entry
120694931 CDS
T07260
Name
(RefSeq) ubiquitin-activating enzyme E1 3-like isoform X1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120694931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120694931
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120694931
Enzymes [BR:
pvir01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
120694931
Ubiquitin system [BR:
pvir04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
120694931
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120694931
Exosomal proteins of other body fluids (saliva and urine)
120694931
Exosomal proteins of colorectal cancer cells
120694931
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ThiF
UBA_E1_SCCH
E1_FCCH
E1_UFD
E1_4HB
BilD_C
Motif
Other DBs
NCBI-GeneID:
120694931
NCBI-ProteinID:
XP_039834191
LinkDB
All DBs
Position
2K:68390618..68395358
Genome browser
AA seq
1057 aa
AA seq
DB search
MRCLRFLSRGFLSMLPSKRSAGSDGAQSKRPKLGDNGASNGTRNGVPPAIDEDLHSRQLA
VYGRETMRRLFASDVLVSGLNGLGAEIAKNLALAGVRSVTVHDVKDVDMWDLSANFFLSD
QDIGNNRALACVSKLQELNNAVLVSALTQELTKEHLSKFQAVVFTDISLDKAYEFDDYCH
SHHPPIAFIKAQVSGLFGSVFCDFGPEFTVLDVDGEDPHTGIIASISNDSPAMVSCVDDE
RLEFQDGDLVVFSEVQGMEELNDGKPRKVKNARPFSFTIEEDTGSYGVYSKGGIVTQVKE
PKVLRFKSLRDAMKDPGDFLLSDFSKFERSPVIHLAFQALDSFRKEHGRYPTAGCEQDAQ
SFLKFVADINEASIDSKQEKIDDKLLRHFASGSRAVLNPMAAMFGGIVGQEVVKACSGKF
HPLYQFFYFDSVESLPTYQLDPQDLKPSNSRYDAQISVFGSKLQKKLQDANIFIVGSGAL
GCEFLKNLALMGVSCSSKSKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAAAAARAI
NPSLQIGALQNRACPDTESVFHDTFWDGLDVVINALDNVNARMYMDMRCLYFQKPLLESG
TLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKT
PNEVNSFLSNPTQYSAAMRKAGDAQARELLERVSECLGKERCITFEDCITWARLRFEDYF
SNRVKQLTFTFPEDASTSTGTPFWSAPKRFPRPLQFSATDSSHIHLIMSASILRAESFGI
AIPDWAKNTSKLADAVNKVAVPEFEPKKGVNIVTDEKATNLSSASVDDVAVIDDLLSKLE
ECAKNLPPGFQMKPIQFEKDDDTNFHMDLISGFANMRARNYSIPEVDKLKAKFIAGRIIP
AIATSTAMATGLVCLELYKVIAGEHPIEDYRNTFANLALPLFSMAEPVPAKVMKHQDLSW
TVWDRWSIKGDLTVAELLQWFSDKGLSAYSMSCGTSLLYNSMFPRHKERLQKKVVDVARE
VAKVEVPEYRRHIDIVVACEDNDGNDIDIPLVSVHFR
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgcttacgcttcctgagcaggggattcctctccatgctcccttccaagaggtcc
gcgggctctgacggcgcccagtccaagaggcccaagctgggggacaatggggccagtaac
ggcactcggaatggggtgccgccggcgatcgacgaggacctgcacagcaggcagctcgcc
gtctacggcagggagacaatgcgccgcctcttcgcctccgacgtcctcgtctctggactc
aatggcctcggtgctgagattgcaaagaatctagctcttgctggcgtcagatctgtcact
gtacatgatgtcaaagatgtggacatgtgggacctctctgccaatttctttttgtccgac
caagatattggaaacaacagggcccttgcttgtgtatccaagttgcaggagctcaacaat
gctgtcctggtatctgctctaacacaggaattgacaaaagagcacttatctaagttccag
gctgttgttttcaccgatataagcttagacaaggcttatgaatttgatgactattgccac
agccaccaccctccaatcgccttcatcaaagctcaagtttctggacttttcggtagtgtc
ttttgtgattttggacctgagtttaccgtacttgatgttgatggtgaagatccacatact
ggtataattgcatctatcagcaatgacagccctgcaatggtatcctgtgttgatgatgag
cgtcttgagtttcaggacggtgatcttgttgttttctctgaggtccagggcatggaagaa
ctgaatgatggtaaaccaagaaaggtcaaaaatgctaggccattttcatttaccattgag
gaggatacaggtagctatggtgtttattcaaaaggtggaattgttacacaagtgaaggaa
ccaaaggttctacgtttcaagtcactaagagatgctatgaaagatcctggcgatttcctt
ctgagtgacttctcaaagtttgaacgttcacctgtaattcacctagcatttcaagctctg
gatagttttaggaaagaacatgggcgatatcctaccgctggttgtgagcaggatgctcaa
agctttctcaagtttgttgctgatattaatgaagcatcaattgattctaagcaggaaaaa
attgatgacaagttgctccggcatttcgcaagtggttctcgagctgttttgaacccaatg
gccgcaatgtttggtggtatcgttggtcaggaagttgtgaaagcatgttcagggaaattc
catccgctttaccagttcttctactttgattctgttgaatctctcccgacataccagttg
gatccccaagacttgaagccatcaaacagccgctatgatgctcagatctctgtatttggt
tccaagcttcagaagaagctgcaagatgcaaatattttcattgtgggttctggtgccctt
ggatgtgaattcttgaagaaccttgccttaatgggtgtctcttgcagctccaagtcgaag
ctaactataacagatgatgatgtcatcgagaaaagcaatttgagccgccaatttctattc
cgtgactggaacattggacaggcaaagtcaactgtggctgccgctgctgccagagctatc
aaccccagcctccaaattggcgcgcttcagaaccgtgcctgtccagatactgaaagtgtg
ttccatgacacattctgggacggactggatgttgtcatcaatgcacttgataatgttaat
gctaggatgtatatggacatgaggtgcctgtacttccagaagccactactggagtcaggg
acgttgggtgcaaagtgcaatactcaaatggtcattcctcaccttactgaaaattatgga
gcttcaagagacccaccagagaagcaggcacccatgtgcacagttcattcttttccacac
aatattgatcattgcttgacatgggctcgttcagagtttgagggtttgctagagaaaaca
ccaaatgaagtaaattcttttctgtctaatcctactcaatattctgctgccatgaggaag
gcaggtgatgcccaggcaagagaactacttgaacgtgtctctgaatgtcttggcaaggag
cgatgcattacatttgaggactgcataacttgggcccgacttaggtttgaggattatttc
tcaaaccgtgtgaagcagctcacattcacttttcccgaagatgcttctactagcacaggc
actcctttctggtctgccccaaagcgctttcctcggcctctgcaattttcagccactgac
tcatctcacattcacctcattatgtctgcttcaatactgagagcggagtcatttggaatt
gctatacctgactgggcaaagaacacaagtaagctggctgatgcagtcaataaggtcgca
gttcctgaatttgagccaaagaaaggggtgaatattgtgacagatgagaaggctactaac
ctttctagtgcctcagttgatgatgttgctgttatcgatgaccttctgtccaagttagaa
gaatgtgcaaagaatctgcctccagggttccaaatgaaacctatccaatttgagaaggat
gatgacactaattttcacatggatttaatatctgggtttgcgaacatgcgtgcaaggaac
tacagcattcctgaggttgacaagttgaaggccaagttcatcgctggaagaatcatccct
gccattgcaacttcaacagccatggccacaggtcttgtgtgccttgagctatacaaggtt
attgctggggagcaccctattgaggactaccgcaacacatttgccaacctagcgctgcct
ctgttctcgatggccgagcctgttcctgccaaggtgatgaagcaccaagaccttagctgg
acggtatgggatcggtggtcgatcaagggcgacctgactgttgcggagctcctgcaatgg
ttcagcgacaagggcctcagtgcttacagcatgtcctgtggcacgtctctgctgtacaat
agcatgttcccgaggcacaaggaaagactgcagaagaaggttgttgatgtggcgagggaa
gtcgctaaggtggaggtccctgagtacaggaggcacatagatattgtggtggcctgcgag
gacaatgatgggaacgacattgatatccctctcgtatccgtccatttccggtag
DBGET
integrated database retrieval system
