Panicum virgatum (switchgrass): 120695092
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Entry
120695092 CDS
T07260
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1-like
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00541
Biosynthesis of various nucleotide sugars
pvir01100
Metabolic pathways
pvir01250
Biosynthesis of nucleotide sugars
Module
pvir_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
120695092
Enzymes [BR:
pvir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
120695092
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
NAD_binding_10
Methyltransf_2
Motif
Other DBs
NCBI-GeneID:
120695092
NCBI-ProteinID:
XP_039834344
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Position
1K:11740743..11743915
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AA seq
668 aa
AA seq
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MATLYKPKNILITGAAGFIASHVATRIVKKYPDYKIVVLDKLDYCSNLKNLLSVSSSPNF
KFVKGDIASADLVNFILVTENIDTVMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACR
QITGQIKRFIHVSTDEVYGETDEDAVVGNHEMSQLLPTNPYAATKAGAEMLVMAYGRSYG
LPVITTRGNNVYGPNQFPEKLIPKFILLAMRGQPLPIHGDGSNVRSYLYCEDVAEAFEVI
LHRGEVGHVYNIGTKKERTVMNVAKDICKLFNLEADKAIKFVDNRPFNDQRYFLNNEKLM
SLGWSERTHWEEGLRKTMEWYVSNSDYWGDVSGALLPHPKAMVMPGGYEGSKEIKGMLAQ
FNNIQTKVAPTSDSVLETHPFKFLIYGRTGWIGGLLGKICEKQGIPYEYGKGRLQERSSL
ILDIQTIKPTHVFNAAGVTGRPNVDWCESHKPETIRTNVVGTLTLADVCREHGLLMINYA
TGCIFEYDAQHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYENVCTLRVRMPISS
DLSNPRNFVTKISRYDKVVNIPNSMTILDELLPISIEMAKRNLRGIYNFTNPGVVSHNEV
LEMYKQYIDPSFKWTNFTLEEQAKVIVAPRSNNELDTTKLEQEFPELLSIKDSLIKYVFE
PNRKVPAN
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggcgacactgtacaaacctaagaacatcctcatcactggggctgctgggtttattgcc
tcccatgtcgctacccgcatcgtgaagaagtaccctgactacaagatcgtcgtcctcgac
aagcttgactactgctccaacctgaagaacctgctctccgtgagctcgtcgccaaacttc
aagtttgtcaagggcgacatcgcgagcgccgaccttgtcaacttcatcctcgtcacagag
aacattgacactgtgatgcactttgcagcccagacacacgtcgacaattcctttgggaac
tccttcgagttcaccaagaacaatatttatggtacacatgtccttcttgaggcctgccgg
cagatcaccggtcagatcaagaggttcatccatgtcagcactgatgaggtttatggagag
acagatgaggatgcagttgttggcaaccatgagatgtcacagctgctccccacaaacccc
tatgcagccaccaaagccggagcagagatgcttgtcatggcctatgggagatcctatggt
cttccagtcatcactactcggggaaacaatgtctatggccctaaccaattcccggagaag
ctcatcccaaagttcattctcttggccatgagagggcaaccccttccaatccatggtgat
ggatccaatgtccggagctacctctattgtgaggatgtcgccgaggcatttgaggtcatt
cttcatcgtggagaggttggacatgtttataacattgggacaaagaaagagaggacggtc
atgaatgtggcaaaagatatatgcaagcttttcaatctggaagccgacaaagctatcaag
tttgttgacaacaggcctttcaatgatcagaggtacttcctcaacaatgagaagctcatg
agccttggatggtccgagcgcactcactgggaggagggcctgaggaagacaatggaatgg
tatgtgtctaattccgactactggggtgatgtttctggggcattgttgcctcatccaaag
gcaatggtgatgcctggagggtatgagggctctaaggagattaaaggaatgcttgctcaa
tttaataacattcagacaaaggtagctccaacatcagatagtgttctggaaacacatccc
ttcaaattcttgatatatggtcggactggatggattggtggacttcttggaaaaatatgt
gagaagcagggaatcccatatgaatatggaaaaggtcgcttgcaagagcgttcttcactc
atcctagacatccaaacgattaagccaacacatgtcttcaatgctgctggtgttactggc
agacccaatgttgactggtgtgaatctcacaagccagaaaccatccgtaccaatgttgtt
ggtaccttgactctagctgatgtgtgtagggagcatggcttattgatgataaactatgcc
acagggtgcatattcgaatatgatgcacaacatcctgaaggatcaggtatcggcttcaaa
gaggaggacacaccaaattttactggttcattttactcgaagaccaaggcaatggtcgaa
gagctactgaaggaatatgagaatgtctgcaccctgcgtgtccggatgcccatatcttct
gaccttagcaacccccggaatttcgtgacaaagatcagccgttacgacaaggtggtgaac
atcccaaacagcatgacaatactggatgagctcctgccgatctcaatcgagatggccaag
aggaacctgcggggcatctataatttcaccaaccctggcgtcgtcagccacaacgaggtc
ctggagatgtacaagcagtacattgaccctagcttcaagtggacaaacttcaccctcgag
gagcaggccaaggtcatcgtcgcgccccggagcaacaacgagttagacaccaccaagctg
gagcaggagttccccgagttgctgtcgatcaaagactcgttgatcaagtacgtcttcgag
ccaaacaggaaggtgccagcaaactga
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