Panicum virgatum (switchgrass): 120695511
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Entry
120695511 CDS
T07260
Name
(RefSeq) ABC transporter G family member 43-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120695511
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120695511
Transporters [BR:
pvir02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
120695511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_29
SMC_N
AAA_16
MMR_HSR1
AAA_33
RsgA_GTPase
AAA_28
AAA_30
Ploopntkinase3
nSTAND3
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
120695511
NCBI-ProteinID:
XP_039834674
LinkDB
All DBs
Position
2K:58545993..58558695
Genome browser
AA seq
1336 aa
AA seq
DB search
LDAPPQPAHARLCNNGGISHRPPATAFSGGRGDAAVSATPATGLISRFGKSNKRTIQILK
DVSGIIKPSRMTLLLGPPSSGKSTLMQALTGKPAKNLKVSGKITYCGHEFSEFYPERTSA
YVSQYDLHNGEMTVRETMDFSRRCLGIGARYDMFPPFVTMLSELARRERNAGIKPAPEID
AFMKATAVEGKETNVMTDITLKILGLDICADIIVGDEMQRGISGGQKKRVKTGEMLTGPA
KALFMDEISTGLDSSSTFQIVKYIRQMVHVMNYTVMISLLQPPPETYNLFGDIILLSEGY
IVYHGPRENILEFFESAGFRCPERKGVADFLQEVTSRKDQQQYWFHDQEHYRYVSVPEFA
QHLKTFHVGQKLQQELQVPYDKSKTHPAALTTTKYGLSSWESLKAVLSREWLLMRRNSFL
YIFKAFELSFLAFLTMTVFFRTKMPSGKFSDSVKFNGALTSSLITIMFIGFPELNMIIKK
LPVFYKQRDYLFFPAWTFGLATIILKIPFSFLESITWTTVTYYVIGFAPAPGRFFSQFLA
YFLTHQMAVSLFRLLGALLKTMVVANTFGMFSLLLVFLFGGFLIPRQTIKSWWIWGYWTS
PMMYSNNAISVSEFLSTRWAGPNTEANIDAPTIGKAILKIKGSFGSQWGYWLSIGAIVGY
IILFNILFLCALTFLSASGGSSNAVISDDDDEKKSADQEEMSQVTHRADEPANRRTQTGM
ILPFQPLSLSFNHMNYYVDMPVAMKEQGFTESRLQLLSDISGAFRPGVLTALVGVSGAGK
TTLMDVLAGRKTGGTIEGNIRLSGYPKKQETFARISGYCEQTDIHSPNVTVYESLIYSAW
LRLSSDVDENTRKMFVEEVMSLVELDVLRDAMVGLPGVSGLSIEQRKRLMIAVELVANPS
IIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDIFEAFDELLLLKRGGHV
IYAGQLGVQSRILVEYFEAIPGVPKITEGYNPATWMLDVSSPLAEARMNVDFADIYANSS
LYRANQELIKELSIPPPGYQDLSFPTKYAQNFLNQCMANTWKQYRSYWKNPPYNAMRYLM
TALYGVVFGTVFWRMGKNVETQQDLNSLLGATYACIFFLGAANLLTATPVFSIERTVFYR
EKAAGMFSPLSYAFALTAVEFLYCIAQGILYTIPIYTMVGYDWKADKFFYFLFFITASFL
YFSMFGAMLIACTPSQILASILVSIILTCWNIFARFLITRPALPVWWRWFYWTDPVAWTI
YGVIASQFGDINRTVTVPGNPDKIVKEILRETYGMKHDFIGYVVLAHFGYILLFLFLFAY
GTKTTSRNGRWLPAGV
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
ctcgacgcgccaccgcagcccgcacacgcaaggctctgcaataatggcgggatctcccac
cgaccaccggcgaccgccttctccgggggccgcggagatgcggcggtctcggccaccccc
gccacgggactcatcagccggttcggtaagtcgaacaagaggacgattcagatactcaag
gatgtcagcggcatcatcaaaccatcgaggatgacacttcttctggggcctccatcatct
gggaaaagcacacttatgcaagcactaactgggaagcctgctaagaatctcaaggtgtct
gggaaaatcacatactgcggccatgagttttcagagttctatcctgagaggactagtgca
tatgtcagtcagtatgatctacacaatggagaaatgaccgtaagagagacaatggacttc
tccagaagatgtctaggcattggtgccagatatgatatgtttcctccatttgtaacaatg
ttatcagaattggcgagacgggaacggaatgctggtattaagcctgcccctgaaattgat
gctttcatgaaagcaaccgcggttgaaggaaaggaaaccaacgttatgacagatattact
ctcaagattcttggacttgacatttgtgctgatattattgttggcgatgagatgcaaaga
ggaatttctggtgggcaaaagaaacgtgtaaaaaccggtgagatgctaactggacctgca
aaggctttgttcatggatgaaatatctactgggcttgatagttccagcacatttcagatt
gtcaaatacatcaggcagatggttcatgtgatgaattatacagtaatgatctcccttctc
cagcctccacctgagacctacaatctatttggtgatatcattttactatcagaaggttac
atagtctaccatgggccacgggaaaacatcctcgaattctttgagagtgctggtttccgg
tgccctgaacggaaaggagtggcagacttccttcaagaggtgacttccaggaaagatcag
cagcagtattggttccacgaccaggaacattatcgttatgtgtcagtcccagagtttgcg
caacatttgaagacattccatgttggccagaagctccaacaagagttgcaagttccttac
gacaaatctaaaacacatcctgctgctttgactaccacgaagtatggattatctagctgg
gagtctctcaaggcagtcttgtccagagaatggttgctgatgaggcgcaactccttcctc
tacatattcaaggcttttgaattgtctttcctggcattcttaacgatgacagtgtttttc
agaacaaagatgcccagtggaaagttttctgatagcgtcaaatttaatggcgctttgact
tcttctttgatcacaatcatgttcattggatttcctgagttgaacatgatcattaagaag
ctacccgtattctataaacagagagactacttgttctttccagcatggacctttggactt
gcaaccattattttaaagattccattttcattcctggagtcaattacgtggacaactgtt
acatattatgttataggctttgctcctgctccaggaaggttcttcagccagtttctagcc
tactttttaacccaccagatggctgtgtccctgtttcggttgctaggcgcacttttgaag
acaatggttgtggctaatacatttggcatgttttcactgcttcttgttttcttgtttgga
gggtttctcatccccagacagaccattaaatcatggtggatttggggctactggacatct
cccatgatgtacagtaataacgctatatcggtcagtgaattcctttccactagatgggcc
ggcccgaacactgaagcaaacattgatgcaccaacaatagggaaggctattctgaaaatt
aaaggctcctttggtagtcaatgggggtactggctttcgatcggtgccattgtaggatat
attattcttttcaacattcttttcctttgcgctcttacattcttgagcgctagtggcggt
tcatcaaatgctgtaatatctgatgatgatgatgaaaagaagtcagcggatcaagaagaa
atgtcccaggtgacccaccgtgcagatgaaccagcaaataggagaacccagacaggaatg
atcttgccgttccagccactttcactttctttcaaccacatgaactactatgttgatatg
cctgttgcaatgaaagaacaaggtttcaccgaaagccgccttcaattgctatctgatatt
agtggcgcattcagaccaggtgttctgactgcactagttggtgtcagtggagctggaaag
accactctaatggatgtattggctggaagaaagacaggtgggactattgagggaaatata
aggctttctggttaccctaagaaacaggaaacttttgctcgcatcagtggttattgtgaa
caaactgatatccattcaccaaatgttactgtgtacgaatcactcatttattctgcttgg
ttgcgcctttcttcagatgttgatgagaatactagaaagatgtttgtagaggaagtgatg
tcactagttgagcttgatgtattgcgagatgctatggttggtctccctggtgttagtggg
ttatcaattgaacaaaggaagagactgatgattgctgtggaactagtagcaaacccttcg
attatattcatggatgagccaacttctggccttgatgctagagctgcagcaattgtcatg
cgtacagtaagaaatacagttaatactgggcgaaccgtggtttgcacgatccatcagccc
agcattgatatctttgaagcttttgacgagcttctattgctgaaaagaggaggccatgtc
atatatgctggccagcttggtgtccaatctcgcatacttgtcgaatatttcgaggcaatt
ccaggtgttccaaaaattacagaaggatacaatccagcaacatggatgctggatgtcagc
tctcctctagctgaggctcgcatgaatgttgattttgctgatatttatgcaaattcttct
ctgtaccgggccaatcaagaacttattaaagagttgagcattccaccacctggataccag
gatctctcattcccgactaaatatgcccagaatttcctaaatcaatgtatggcaaataca
tggaagcaatatcgatcttattggaagaatccaccctacaatgccatgcgctatcttatg
acagctctctatggtgttgtgttcggcacagtcttttggcgcatgggaaagaatgtagaa
acacagcaggacctgaacagtctactcggagccacctatgcttgtattttcttccttgga
gctgcaaatttgctcacagctactccggttttttctattgaaaggacagtcttctaccgt
gaaaaggctgctgggatgttctctccattgtcctatgcatttgccctgacagccgtggag
tttctctactgcatagctcagggtattctttatacaatccctatctacactatggttggc
tatgattggaaggcagacaagtttttctacttcctgttcttcatcaccgcaagcttcctc
tacttctcgatgtttggtgcaatgctaattgcctgcactccttcccaaatactcgcaagt
attcttgtttcaatcattctcacatgttggaacatttttgccagattcctcataacccga
ccggcattgcctgtctggtggcgatggttctactggactgacccggtggcctggaccatc
tatggcgttattgcatcacagtttggcgacataaaccgcacggttacagttcctggtaac
cctgataaaatagtgaaggaaattctgagagaaacttatggcatgaagcatgacttcatc
ggctacgtcgtgctggcgcactttggctacatcctcctgttcctcttcctcttcgcgtac
ggcaccaagacaacttccagaaacggtagatggttaccagcaggtgtttaa
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integrated database retrieval system
