Panicum virgatum (switchgrass): 120695544
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Entry
120695544 CDS
T07260
Name
(RefSeq) protein FAR1-RELATED SEQUENCE 5-like
KO
K17604
zinc finger SWIM domain-containing protein 3
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120695544
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120695544
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GFIT
Motif
Pfam:
FAR1
MULE
SWIM
ZSWIM1-3_RNaseH-like
Transposase_mut
Motif
Other DBs
NCBI-GeneID:
120695544
NCBI-ProteinID:
XP_039834696
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Position
2K:60576060..60579751
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AA seq
885 aa
AA seq
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MPSAPGEKDPQDAPGPATAPPLVQALRPVNGTGSPTIDPRLAQQSWPGHVVLLRPCVPWP
PQVPVQLLLNPANPQQNADAMVDVAAADVNPAIDSCDDNMLPKVNMLFDGESDVYEFYNA
YAEKVGFFVRRSTLWTTSKNIITRRTFVCSREGFREKKKGAKEAKCPRPETRIGCPASLT
IRLTANDQLATASTIHMLKAKKIRRKARAVRENLVDDTVSTPEFENEDEAYEFYSMYAGK
IGFNVRRASMTVNNENVITRRMFVCSKEGFREKKRGAKRVKKPRPETRTGCPACMVIRLG
TNGKYQVTEFVTFHNHQLGAVAASDLVMASQSTENDQDDGFDLADRSPDDSVHKQNLINE
SVTINFLEGRSCKRYKCTKTPHYGDVGATLEYLQRMQHDNPSFFYAVKSDENGNFTIFFW
ADSKSIVDFVHFGDVVCFDSGYALQGYGRPLALFTGLNHHKQTVVFGAALLYDESDEAFR
WLLDTFKMAMNGTHPKTLLTDRSAAISEAIAATLPATAHRYCVWQIYQHALQQLSQAFHG
SRTLEGNFKRCLFDCEDEEEFLTAWKEMLEKYDLEDNQWLADLFSIKEKWALPYGRDAFY
ADMKSVQQKESLTSELKKHLSLEYGLLNFFEQFERLLCDRRSAELEFDVNANQSTKKPPS
MRMLRQAANVYTPAAFKMFEREFELYMDCMLYSCGEMGTISEYRISVEDNPKDHFVKFDS
HNSMMNCTCKTFEFIGIPCRHMLKVLDTRNIKDLPVQYIVKRWRKDAKSGPSNSGCAFSF
DGDPESAQTKRYNLLCRIFSISAARAATSAESFTYMENQSNILMDQVEQVIQTRPPDIVD
LIGANCDRTQNSVDNIVTEGIHSHTNFLNGSADGSLTFPFTLDYR
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcggcacctggggagaaggatccccaagatgctccggggcctgcgactgcacct
ccgctggtgcaggctctcaggcctgtcaatggcacaggcagtcccaccatagacccgagg
ctagcgcagcagtcttggcccggccatgtagtgctcctgcgcccatgtgttccttggcct
cctcaggtgcctgtccagctgctgcttaatcctgcaaatccgcagcaaaatgcagatgct
atggtggatgtggctgcagcagatgttaaccctgcaatcgatagctgtgatgataatatg
ttgcccaaggtgaatatgctgttcgatggcgagagtgatgtgtatgagttctacaatgcg
tatgcggagaaggtgggcttctttgtccggaggtcaacgctctggacaacctcaaagaac
ataatcactaggagaacttttgtttgctcaagagagggttttcgggaaaagaagaagggg
gccaaggaagcaaagtgcccacgccctgaaacaagaattgggtgccctgcgagcctcacc
attagacttactgctaatgatcagctggcaacggcatctacaattcatatgctcaaagca
aagaaaatcaggcgcaaagcacgggctgtgagagaaaatctggtcgatgatactgttagt
acgccagaatttgaaaatgaagatgaggcatatgaattttacagcatgtatgcaggaaaa
attgggttcaacgtgcgaagggctagcatgacagtgaataatgagaatgttataaccaga
agaatgtttgtttgttcgaaagagggtttccgtgagaagaaaagaggagcgaaaagagta
aagaagcctcgaccggagacacgaactggctgtccggcatgtatggtcatcaggcttgga
actaatggcaaatatcaagtcacagaatttgttacctttcacaatcaccagcttggggct
gtggcagcgtctgatctcgtgatggcatcacagagtacagaaaatgatcaagatgatggc
tttgatctggcagatagatcacctgatgattctgttcacaagcaaaatcttattaatgaa
agtgtcactataaatttcctagaaggtagaagttgcaaaagatacaagtgtacaaagact
ccacactatggtgatgtcggtgctactctagagtacctgcaaaggatgcaacatgataac
ccttcattcttctatgctgtaaaatctgatgagaatgggaactttacgatttttttctgg
gcagattcaaagtctattgttgatttcgtccattttggtgatgtagtatgttttgattca
ggatatgcattgcaaggctatggtaggccacttgctttgtttacaggtttgaatcatcat
aagcaaacagttgtctttggtgctgcattactttatgatgaaagtgatgaggctttcaga
tggttattagatactttcaagatggcaatgaatggaacgcatcccaagacattgttaact
gatagatctgctgcaataagtgaagctattgcggccacattgcctgctacagcccatcgt
tattgtgtgtggcaaatttaccaacatgctcttcagcagttgagtcaagctttccacggt
tcaagaactctagaaggcaacttcaagagatgtctatttgattgtgaggatgaggaggag
tttttgacagcatggaaggaaatgttggaaaagtatgacctagaagataatcaatggcta
gcagatttgttctcaattaaggagaaatgggcactgccatatggccgtgatgcattttat
gctgatatgaaaagtgtccagcagaaggaaagcttgacgagtgagttgaaaaaacattta
agcttggaatatggccttttaaacttctttgagcagtttgaaagactgttatgtgatcgt
cgatctgctgagctggaatttgatgtgaatgctaaccagagcacaaagaagccaccatct
atgcgaatgttaaggcaagctgctaatgtatatacacctgctgcctttaaaatgtttgag
agggaatttgagttatacatggattgcatgctttacagctgtggtgagatgggaacaatt
tctgagtacaggataagtgttgaagacaatccaaaagatcattttgttaaattcgattcg
cacaattccatgatgaattgtacttgtaagacgtttgagtttattggcatcccatgtcgc
catatgctgaaggtacttgacacgaggaatatcaaggaccttcctgttcagtatatcgtg
aaaaggtggaggaaggatgccaaatcaggaccttcaaatagtggttgcgctttctcattt
gatggtgatcctgagtctgctcagacgaaacgttacaatttactgtgtcgcatattcagt
atatcagcggctagggctgcaacctctgcagaatcattcacatatatggaaaaccagtca
aacatactgatggatcaagtagagcaagttattcaaaccaggcctcctgacattgttgac
cttattggtgctaactgtgaccgaactcaaaattcagttgacaatattgtcactgaaggc
attcacagtcatactaattttcttaatggctccgctgatggctctctaacatttccattc
acattggattaccgctga
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