Panicum virgatum (switchgrass): 120695563
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Entry
120695563 CDS
T07260
Name
(RefSeq) glucan endo-1,3-beta-glucosidase 4-like
KO
K19892
glucan endo-1,3-beta-glucosidase 4 [EC:
3.2.1.39
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120695563
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pvir00537
]
120695563
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.39 glucan endo-1,3-beta-D-glucosidase
120695563
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pvir00537
]
Enzymes
120695563
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_17
UQ_con
X8
UEV
DUF6559
Motif
Other DBs
NCBI-GeneID:
120695563
NCBI-ProteinID:
XP_039834716
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All DBs
Position
2K:61851236..61858703
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AA seq
725 aa
AA seq
DB search
MLPKRPHGVVMLLMLMVFDVSGAFVGITIGNEMSNLPSATDIVAILKEKKIQHVRLIDSN
HQMLTALANTGIEVMVGVPNDQLLCVGQSRSTAADWINKNVAAYVPATNITYIAVGDEVL
TNIPNAALVLVPALQFLQSALLAANLNTQVKISSPHSMDMISKAFPPSIATFNSTWNTVM
SQYLRFPKDTGSSFMLNAQPYYGYVGGQGVFPLEYALFRSLNPNSQISDPNTNLFYTNMF
DAIIDATYNSIQAMNFTEIPVLVTASGWPWRGGPNEKAATVDNALAYNTNLIRHVLNNSG
TPSQPMNQSSTYIFELFNEDLRSGPESEKSWGIMFPNTTTVYSLSFEDVATTIPESPALR
GMFCVANSSAPHSALKHSLDWACGPGSANCSAIQPGQPCYESDNIVAVASYAFNDYYHRT
QASGGTCSFNGTAMMTSTDPSHDPCIFAGSTGANGSNGGTASGPVSPDSFASKSQSCWLT
HLAAALLLILESTLRAVTNSLPGTLEVPNDLSPVHMPHLDGEPAHTVSPSVTVAAAMSSS
SSFPTSRFPFAAGAGAPGGGGGGGGGSSVRPWGSSGGTSVSSSGKRIQKELLDLNASDCS
AGPKGDNLYHWLSTIIGPQGSPYEGGIFFLDIVFPPDYPFKPPMVTFKTRIYHCNVDATG
KVHLGILKDGWSPAFTISKVLLAIKDIISNPDPYTPLVMNISRQYLTDRTKHDEIAAEWT
MRFAR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccaagcgaccacatggcgtggttatgctgttaatgctcatggttttcgatgtt
tcaggcgcatttgttggtatcactattggcaacgaaatgtcaaacctaccatcagcaaca
gacatagtggctatccttaaagaaaagaagattcagcatgttcgtctgattgattcaaac
catcagatgttgactgcccttgcaaatactggaatagaagtcatggttggggttcccaat
gatcagctgctatgtgtggggcagtctcgttccacagctgctgattggattaacaagaac
gtcgctgcttatgttccagcaactaacatcacatatatcgcagtgggtgatgaggttctt
actaacattccaaatgcagcccttgttcttgtacctgcattgcaattcctccaatcagca
ctgttagctgcaaacctcaatactcaggtgaaaatctcgagtccacattcaatggatatg
atctcgaaggcatttcctccctccattgccactttcaattcgacatggaacacagtaatg
tctcagtatcttcggtttccgaaggatacaggatcttcattcatgctgaatgcccaacca
tactatggctacgtcggagggcaaggcgtattccccttggagtatgcactgttccgctct
ctcaatcccaacagtcaaatttcagatcccaacaccaatctgttctataccaatatgttt
gatgcaataattgatgctacttacaactcaatccaagcaatgaatttcacggagatccct
gttctggtcacagcttctggctggccatggcgtggtgggccaaatgagaaggctgctact
gttgataatgctttggcctacaatacaaacctcatacgtcatgtactgaataattctggt
acacctagccaaccaatgaaccagtcgagcacctacatctttgagctattcaacgaggat
cttcgttcaggacctgaatcagagaaaagttgggggattatgtttcctaacacaaccact
gtgtactctctatcatttgaggacgtggccacaactatcccagaatcaccggctctgcgt
gggatgttttgtgtggcaaattcaagtgcaccccatagtgcacttaagcatagtttggat
tgggcatgtggccctggctctgcgaactgcagtgcaattcagcctggacaaccgtgctat
gaatcagataacattgtagctgttgcatcatatgctttcaacgattattatcatagaaca
caagctagtggtggtacatgcagctttaatggcactgcaatgatgacatcaactgatcca
agccatgacccatgcattttcgctggaagcactggcgccaacggcagcaacggtggtaca
gcttctgggcctgtaagccctgacagttttgcttcgaaatcccaatcctgctggttgact
cacctagcagctgcattgctgctcattctagaatcaacattgcgagctgtgacaaacagc
ttacctggaacgctggaagttccaaatgatctgtcccccgtgcatatgcctcacctggat
ggtgagccggcccacacggtttcaccctccgtcactgtcgctgcggccatgtcctcgtcc
tcgtccttccccacctcccgcttccccttcgccgccggcgccggggcccccggcggcggt
ggcggaggaggaggtggaagcagcgtgcggccgtgggggtcgagcggcgggacgtcggtt
tcgtcttcggggaagcggatacagaaggagctgctggacctcaacgcctccgactgctcc
gccgggcccaagggcgacaacctctaccactggctgtccaccatcatcgggccccaagga
tcgccgtatgaaggagggatatttttccttgatatcgtgtttccccccgattatcctttc
aaacctccgatggtaactttcaaaacaaggatttaccactgcaatgttgacgccactggt
aaagtgcatttgggcattctgaaggatggctggagtccagctttcactatttcaaaggtg
ttactggccatcaaagacatcatcagcaatccagatccatacaccccgcttgtgatgaac
atttcacgtcagtatctgactgacagaactaaacacgatgaaatagcagctgagtggaca
atgaggtttgcaagatag
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