Panicum virgatum (switchgrass): 120695659
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Entry
120695659 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120695659
KO
K11975
E3 ubiquitin-protein ligase RNF144 [EC:
2.3.2.31
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120695659
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
120695659
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
120695659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_UBOX
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
120695659
NCBI-ProteinID:
XP_039834807
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All DBs
Position
2K:45055793..45058376
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AA seq
581 aa
AA seq
DB search
MFYCPFKDCSALLVDERGQCEAEIRKAECPCCSRMFCVQCKVAWHYNITCEDFRRLGNDE
GRLDDLLLRKVRQESMAQPDPVGSCQSLQKLETHQGINVGHTTLISIGDMDNCKGKKPFV
AMLQELDQCSQGANVMARSEFYCTICMETVDLKDLFPITGCTHLFCVGCMNQYITTKVED
NVFSIGCPEPGCKDGLLDPEACRDIIPLQLFHRWGTALCDSALGAFKFYCPFMDCSVLLF
NECGPRDAAIRKAECPHCSRMFCARCKVAWHHGVTCEDFQRLRNDEQGQDDLPLKKAVRK
NKWERCLRRVVSTYKSLCKSKANPNIDVSHSTLISTEDMDSRKGKEPLDDMLMELGQSFP
GVNAMASSEFYCTICMEAVHVRELFPISGCKHLFCISCVSQYITAKVEDNVLSIGCPDPG
CKYGALDPEACRDVIPPQLFQRWGAALCDSALGSFKFYCPFNDCSALLVHEHGHGEAAIT
KAMCPHCRRLFCAQCKVAWHDNIACTEFQRLGKDERGKNDLLLRKVARESRWQRCPKCKM
YVERAEGCVYIVCRCQHRFCYLCASPMSKGIHHCSRCKRTW
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgttctactgccccttcaaggactgctcggcgctactggtcgatgaacgtggacaatgt
gaggcagaaataaggaaagctgagtgcccatgctgctccaggatgttctgtgtgcagtgc
aaggtggcatggcactacaacatcacctgtgaagatttccggaggctcgggaatgatgag
gggagactagatgacttgctactgaggaaggtcaggcaggagagcatggcgcaacctgat
cctgtgggctcctgtcaatctttgcaaaagttagagacacatcaagggattaatgtgggt
catactaccttaatctcaatcggagacatggacaactgcaaggggaaaaagccatttgtt
gctatgcttcaggagctggaccaatgctctcagggtgccaatgtgatggcccgcagcgag
ttctactgcaccatatgcatggagacagtagacctcaaagacctctttcccattactggg
tgcacacaccttttctgtgttggttgcatgaaccagtacatcactacgaaggttgaggat
aatgtgttctccattggatgcccagaaccggggtgcaaggatggtttactggacccagag
gcgtgccgtgacattatcccactgcagctattccataggtggggcactgcgctctgtgac
tcggcactgggggcattcaagttctactgccccttcatggactgctctgtgctgttgttc
aacgaatgtggccctcgcgatgcagcaataaggaaagctgagtgcccacactgctcccgg
atgttttgtgcacggtgcaaggtggcatggcaccacggtgtcacatgtgaagatttccag
cggcttaggaatgatgaacaggggcaagatgacctgccgctgaagaaggctgtgcggaag
aataagtgggagaggtgcctccggcgtgttgtgtctacttataaatcattgtgcaagtca
aaggcaaatccgaacatcgatgtgagtcatagtaccttgatctcaactgaagacatggat
agtcgaaaagggaaagagccattggatgatatgcttatggagctaggccaaagctttcct
ggtgtgaatgcgatggccagcagtgagttctactgcaccatatgtatggaggcagtgcac
gtaagggagctctttcctatttctgggtgcaaacatctcttctgcatcagctgcgtgagc
cagtacattaccgccaaagtagaggataacgtgttgtccattggctgccctgacccagga
tgcaaatatggtgcattagacccggaggcgtgccgtgacgtgatcccgccgcagctgttc
cagaggtggggcgctgcgctttgtgactcagcgctgggatcattcaagttctattgtccc
ttcaacgactgctcggcgttgcttgttcatgagcatggccacggtgaggcagcgataaca
aaagctatgtgcccacactgccgccgcttgttctgtgcacaatgcaaggtggcatggcat
gacaacatcgcctgcacagagttccaacggcttgggaaggacgagcggggcaagaatgac
ctgctgctgaggaaggtcgcacgggagagcaggtggcagaggtgccccaagtgcaagatg
tacgtggagagggccgagggctgcgtgtacatcgtctgcaggtgccagcatcgtttctgc
tacctctgtgcctccccaatgtccaagggcatacatcactgcagcaggtgcaagaggacc
tggtga
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