Panicum virgatum (switchgrass): 120695748
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Entry
120695748 CDS
T07260
Name
(RefSeq) centromere/kinetochore protein zw10 homolog
KO
K11578
protein transport protein DSL1/ZW10
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120695748
03036 Chromosome and associated proteins [BR:
pvir03036
]
120695748
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
120695748
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
RZZ complex
120695748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZW10_C2
Zw10_middle
ZW10_C
Dsl1_C
Motif
Other DBs
NCBI-GeneID:
120695748
NCBI-ProteinID:
XP_039834908
LinkDB
All DBs
Position
2K:complement(50930322..50938219)
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AA seq
747 aa
AA seq
DB search
MAADDVRELLLSTTADASDPSTPLSAPDLRLLIDRLRLRSDRLHASALSFAASHRGALAS
SLTRAASAADSSASLESSLDSALAPLASSPDLSDLRALADRLLAARRELAERQEHLAAAS
TIASFAARLREARAAANPLDTAAAAAAELKPLLIDAERSGSGEDGPVVFGLLRSDWEQLV
DELQVGLAKNVEECMEFAPEGGKVVVRAIPKSCSSRKQSVELSVALQALEIIDALDYGMA
KIADLMMKHILVPAISNIHVAVSVEVIQEVGPEHSVSVLTIVASEGLKDNKDGLSLYSRI
IDVIKFACKFICMENSKWVQSFAKLTWPRISDMVITHFLSKAVPNEASKLIEFQDVVRST
AEFENKLRSMMFLLPDRKDAKLTQFVDDVEVHFAIRKRSEILVKARNILVQYDYDNPLES
GDRGDSVVDLLFLPEKCFTSKSVLLLMKLVHGALKDASMSSARVAKEFCFAARDVLLLYK
AIVPVQLEKHLDSISQVAAIVHNDFYHLSQEILGLAFQYHADFPIDLQKQVVFVDLAPIF
SQMADVVLRRQIQLTIDTISEAIDGADGFQNTHQPQHYESAKFSIDQVVFILEKIRIMWE
SILPKSTYRKSMYHVLGSVFSRIARDMLLIDDMAAEETLQLQGLIHLALENISLLFLSLV
DNDDGSTKFLDHDTWIQLDGTVPSLKKFRKLAELLDMSLKSITAAWESGDLVSCGFTSSE
VQNFIKAIFADSPLRKECLGWIVRTPA
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgacgacgtgcgcgagctcctcctctccaccaccgccgacgcctcggacccc
tccaccccgctctccgcgcccgacctgcgcctccttatcgaccgcctccgcctccgctcg
gaccgcctgcacgcctccgccctctccttcgctgcctcccaccgcggggcccttgcctcc
tcgctaacccgcgcggcctccgctgccgactcctccgcctcccttgagtcctccctggac
tccgccctcgcgccgctcgcctcctcgcctgacctctccgacctcagggccctcgccgac
cgcctccttgccgcgcgccgcgagctcgccgagcgccaggagcaccttgccgcggcctcc
acaattgcttcgttcgctgcccgcctccgagaggcccgtgcggcagcgaacccccttgac
acggctgctgctgctgctgctgagctcaagcccctactgattgatgccgagcgatccgga
tccggtgaagacggtcctgtcgtgtttgggctcctcaggagcgattgggagcagcttgtc
gacgagctgcaagtgggacttgcgaagaatgtggaggagtgcatggagtttgcacctgag
ggagggaaagtggtggtaagggctattccaaaatcatgttccagtcgaaagcaaagtgtc
gagctttctgtggcgctgcaggcattggagatcattgatgccctagactatggaatggct
aagattgcagacttgatgatgaaacatattctggtcccagcaatcagtaacatacacgtt
gcagtttctgtagaagtgattcaagaagttggcccagaacactcagtatcagtcttgacc
atagtcgcttcagaggggctaaaagacaacaaagatggtttgagtctgtactcacgaata
attgatgtcatcaagtttgcgtgcaagttcatttgcatggaaaatagcaagtgggttcag
tcttttgcaaagttaacttggccaagaatttctgatatggttatcacacactttctctcc
aaggctgtaccaaatgaggcatccaagctaattgagttccaagatgttgtacggagtaca
gctgaatttgagaacaaacttaggagcatgatgtttcttttgcctgatagaaaggatgcc
aagttgacccaatttgttgatgatgttgaagttcattttgctatacggaagagaagtgag
atcttggtgaaagcaaggaacattcttgtacaatatgattatgataaccctctggaatct
ggtgatcgaggtgattctgttgttgatctacttttcctgccggagaagtgttttacatct
aaatcagtacttctattaatgaaattggttcatggagccctcaaggatgcatcgatgtca
tccgcaagagttgctaaggaattttgctttgctgctagggatgtcttactcctgtataag
gctattgtgccagttcagctagagaagcatcttgatagcataagtcaagtggctgctatt
gttcacaatgacttctaccatttatcccaagaaattcttggccttgcatttcagtaccat
gcagattttcctattgatctacagaaacaagttgtttttgtggatttagcaccaatcttc
tcccagatggcagatgttgtattgagaagacaaatacaactcactattgataccataagc
gaggctatagatggtgctgatggttttcagaacacacaccaacctcagcattatgagtca
gcaaaatttagtattgatcaggtcgtgttcattttggaaaagatccgcatcatgtgggaa
tcaatactgccaaaatcaacctacaggaaaagtatgtatcatgtccttggctctgtcttc
tccagaattgcaagagatatgcttctgatagatgacatggcagcagaagagacattgcag
ctgcaaggccttatccatttggctctcgaaaatatctctttgctatttctttctctggtt
gataacgatgatggcagcacaaagttcttagaccatgacacttggattcaattggatgga
actgtcccatctttgaaaaagtttcgtaagctagcagagttgcttgatatgtcattgaag
tccatcacagcggcttgggaaagtggagacctggttagctgtggtttcacatcatctgag
gtgcaaaatttcatcaaagcaatatttgctgactcgcctcttaggaaggaatgccttgga
tggatcgttaggacaccagcttag
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