KEGG   Panicum virgatum (switchgrass): 120695783
Entry
120695783         CDS       T07260                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like isoform X1
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120695783
Enzymes [BR:pvir01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     120695783
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    120695783
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_4 zf-rbx1 RING_XB3-XBAT31 zf-RING_10 Zn_ribbon_6 Prok-RING_4 zf-RING_4 Sina_RING zf-RING_6 zf-Nse zf-P11 U-box zf-RING_11 DZR TRAF3_RING
Other DBs
NCBI-GeneID: 120695783
NCBI-ProteinID: XP_039834948
LinkDB
Position
2K:complement(51373692..51377090)
AA seq 185 aa
MSGTRRAPRRQSQDGTAGKVVVNLEASSPVVGSPHGVPATVAGAQNSPIDVDAIEDEVQA
ISPSRVPPPRRNRRIRRRPVTVVDLEVEGVQEGNKRQRVVPVHCLSQKKGEGSSFQSNKE
VPKEPIFTCPICWNKMEDPSTTSCGHIFCSTCIKQAIKVQKKCPTCRKGLRANSIHRIYL
PSTAS
NT seq 558 nt   +upstreamnt  +downstreamnt
atgagcggtacaaggcgtgccccgaggagacagtcgcaagatgggacagctggtaaagta
gtggtgaacttggaagcaagctccccagtggtgggtagccctcatggagtaccagctact
gttgctggcgcacaaaactcacctattgatgtggacgcaattgaagatgaagtgcaggca
atatcgccctcacgagtgccccctccaaggaggaacaggagaatcaggaggcgaccagta
acagtggttgacttggaggtggaaggtgtccaggaagggaacaaacgccagagggttgta
cctgtgcattgcctctctcaaaaaaagggtgaagggtctagctttcagtcaaataaggag
gttcccaaggaaccaatttttacctgcccaatatgttggaataagatggaggatccctcc
acaacatcttgtggccatatcttctgcagcacatgcatcaagcaagccatcaaggttcag
aagaaatgtccaacgtgcaggaagggcctgagagcaaatagtatccatcggatttacctt
ccaagcactgctagttaa

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