Panicum virgatum (switchgrass): 120695794
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Entry
120695794 CDS
T07260
Name
(RefSeq) meiosis-specific protein PAIR2-like
KO
K12778
meiosis-specific protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120695794
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
120695794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC84
HORMA
DsrD
Motif
Other DBs
NCBI-GeneID:
120695794
NCBI-ProteinID:
XP_039834962
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Position
2K:51443423..51457106
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AA seq
1009 aa
AA seq
DB search
MVMAQKTKEAEITEQDSLLLTRNLLRIAIYNISYIRGLFHEKYFSDKSVPALEMKIKKLM
PMDAESRRLIDWMEKGVYDALQKKYLKTLLFCICEEEGPMIEEYAFSFSYPNTSTEEVAM
NMSRTGSKKGSTTFTSNASEVTPDQMRSSACKMIRTLVSLMRTLDPMPEERTILMKLLYY
DDVTPEDYEPPFFKGCAENEAINIWNKNPLKMEVGNVNSKHLVLALKVKSILDPCDDNNV
NSGDDGMSVDNESDQDGDFSDTEVRPSEADRYVVAPNDGKCKGQSTGTISEDDTQDAAHE
EELTTQVKEWICSKETGSIYVSDVLSNFPDISMEMVEDIMERLLKDGVLSRASKDGYTIN
QTVDPKTPHVKKEVIMQNVSPTEGTKQNNDDLIYMKALYHALPMDYVTIAKLQGKLDGEA
NQNTVRKLIDKMVQDGYVKNSANRRLGKAVIHSESSNRKLLEIKKILEGNDGEQMAIDTN
AEHAESERKELLKVHEMRDGSTMGCLHSIGSDLTRTRELPELQQNVSMQSGQEASVMNKD
PSRTPTSARELAVPVCSLESGVLGQKIKRSLTVGSQMQSTQDKRSRKASMVKEPILQQGR
RHRYGSKHRDKLGATLTRFRSKLSDLRRALLQGSPSSQPPQPRLWCPFCSTDLVDLDDRS
ACSSAIYHLASGEHLKGVKDFLRKHGGGRDQVDSLRISEDELAKWEKGCESLGKGAKMET
EGLIGPSRGPMKDIQNESTCDNLDSCAETNIPSFSNTSSYVVMPLQIPTNGAYHPISTAC
HAAVASASVSYSAPYGTVGVPITPWGSARTHEQQAVLSTNCFHSTGPEMKGHQSTILGNG
SGPLISCDAHILPPQVQQSHPGGNLSIGPRANVHTGAPPPWLKANEHDPNNLLLRSRGPP
GKGKSRKLNPKRVGAAWAERRRAEMEMEKRGEIVPETSDSSWLPNFGGVWQSGTRKESRK
DFEKNHKLHDMKSNHELSLEIKPYISKRMRAGVDKASDNAEQLGSHLEQ
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggctcagaagacgaaggaggcggagatcacggagcaggattcgctacttcta
acaaggaatttgcttcggattgccatatacaacatcagctacatcagaggcctattccat
gaaaaatacttcagtgataagtcggttccagcactagagatgaagattaagaagctgatg
ccgatggatgccgagtcgaggaggctgattgattggatggagaaaggtgtctatgatgcg
ctgcaaaagaaatatctcaagacccttctcttttgcatctgtgaggaggaaggccccatg
attgaggagtatgccttttcatttagctaccccaacaccagtactgaggaagttgcaatg
aacatgagtcgcacagggagcaaaaagggtagcactacgtttacttcaaatgcttcagaa
gtaactcctgatcagatgaggagctctgcctgtaagatgatcagaacactggtttcactt
atgaggaccttggacccaatgccagaggagcgaaccattctaatgaagctgctgtactat
gatgacgtcacacctgaggattatgagcctcctttcttcaagggttgtgctgaaaatgaa
gctattaatatatggaataaaaaccccttgaagatggaagtggggaatgtcaatagcaag
caccttgtgttagctttgaaggttaagagtatccttgatccatgtgacgacaacaatgtt
aacagtggagatgatggcatgagtgtggataatgagtcagatcaagatggtgacttttct
gatactgaggttcgtccatctgaggcagatcgttacgttgtagctcctaatgatggaaaa
tgcaaaggtcagagtactggtactatttcagaagatgatactcaagatgctgctcatgag
gaagagctaacaacccaagtaaaagagtggatatgctcaaaagaaactggaagcatttat
gtttcagatgtcctttctaacttccctgacatatccatggaaatggttgaagatatcatg
gagaggctacttaaagatggtgtactatccagggcaagcaaagatggttatactatcaac
cagactgttgatcctaaaacacctcatgtaaagaaggaggtcatcatgcaaaatgtatca
ccaactgaaggaaccaaacagaacaatgatgatttgatatatatgaaggcattatatcat
gcacttcccatggattatgtgacaatagccaaacttcaaggaaagctggatggggaagcc
aaccagaatacagtccgaaagttgatcgacaaaatggtgcaagatggatatgtgaagaat
tcagccaaccgaagactgggcaaagcagtcattcactccgaatccagtaacagaaagctc
cttgagataaaaaagatactggaaggcaatgatggcgaacagatggccattgacaccaac
gcagagcatgctgagtctgagcgcaaagaacttctgaaagtccatgaaatgagagatggc
tccacaatgggttgcctccactcaatcggatctgatcttacacgtacccgggagctacca
gagttgcagcagaatgtgtccatgcagagcgggcaagaagcttcggtaatgaataaggat
cctagcaggactccaacaagtgctcgtgagctggctgtgcctgtttgttccctggagagt
ggagtgcttggacagaaaatcaaaaggtcccttactgttggtagtcagatgcaatctacc
caggacaagcgatccaggaaggctagcatggtgaaggagccgatactacagcagggccgg
cgccaccgctacggcagcaagcaccgggacaaactcggcgccacgctcacccgcttccgg
tccaagctatccgacctccgccgcgcccttctccagggctccccctcttcccagccgccg
cagccccgcctctggtgcccattctgctccaccgatctcgtcgatctcgacgaccgctcc
gcctgtagcagtgcgatttaccatctggcaagtggtgagcacctgaagggtgtgaaggat
ttcttgcggaagcatgggggagggcgggatcaggtggattcgcttaggatttcagaggat
gagcttgctaagtgggagaaaggctgtgaatccttgggcaaaggagcaaagatggagact
gaagggctgattggaccgtcccgtgggccaatgaaagatatccaaaatgaatctacctgt
gataatttggatagttgtgcagaaaccaatatcccatcttttagtaatacttcatcttat
gttgttatgcctttacaaattcctaccaatggggcataccaccctattagtacagcgtgt
catgcagctgttgcttctgcaagtgtttcttattctgctccatatggaactgttggagta
cccatcacaccttggggatcggccagaacacatgaacagcaggctgtgctgtctacaaac
tgttttcacagtactggacctgaaatgaaaggtcatcaatctactatccttggaaatgga
tcaggcccgttgatttcttgtgatgcacatattttacctccgcaggtccaacaaagtcac
cctggaggaaatttgagcattggcccaagagcaaatgtgcacactggtgctcctcctcct
tggttaaaagctaatgagcatgatccgaataatttgttactcagaagccgtggtcctcct
gggaaaggaaaatcgaggaaactcaacccaaagcgtgttggtgctgcatgggcagaaaga
agaagagctgaaatggaaatggagaagcgaggagaaattgttccagaaacatctgattct
agttggctacctaattttggtggtgtctggcaatctgggaccagaaaggaatcgaggaaa
gattttgagaagaaccacaaacttcatgacatgaagagcaaccatgagttatccttggag
ataaaaccatacatcagcaaacggatgcgtgcaggcgttgataaagcttctgacaatgct
gaacagcttggcagtcatctggaacagtaa
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