Panicum virgatum (switchgrass): 120696143
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Entry
120696143 CDS
T07260
Name
(RefSeq) ornithine decarboxylase-like
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00330
Arginine and proline metabolism
pvir00480
Glutathione metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir04148
Efferocytosis
Module
pvir_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
120696143
09106 Metabolism of other amino acids
00480 Glutathione metabolism
120696143
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120696143
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
120696143
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Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
120696143
NCBI-ProteinID:
XP_039835222
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All DBs
Position
2K:complement(54286621..54288455)
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AA seq
411 aa
AA seq
DB search
MVGSSPLQAMLVAPGVKDRKVLAFERRDALKDKDAASGLLRAVLASNPAQRTAFYAFDLA
RAADLYWAWRRALAGVRPCYAVKCNPDPALLGALAALGAGFDCASRAEIEAVLALGVRPR
DIVYANPCKPEPHLEYAAEVGVSLATYDSEEEVAKVKRCHPNCELLLRLKGPDGGDARVD
LGTKYGAHADEVVPLLRAAQCAGVTVAGVSFHVGSGANNLAVYRGAIEAARAAFDAAAAL
GMPPMRVLDVGGGFVSGPTFDEAAAVINDALAQHFGDLPCVEVIGEPGRYFAETAFTLAA
RVIGKRTRGEVREYWIDDGLYGSLNCIVMDHYVPTPRPLATPRPGEKTYTSTVFGPTCDS
LDTVVTGYQLPEMSVGDWLVFDNMGAYTTGAGSNFNGFATSDIKIYVAYSS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggtcgggagcagccccctgcaggccatgctggtggcccccggcgtcaaggacaggaag
gtgctcgcgttcgagcgccgcgacgcgctcaaggacaaggacgccgcctccggcctcctc
cgcgccgtcctcgcctccaacccggcccagcggaccgccttctacgccttcgacctcgcc
agggccgccgacctctactgggcgtggcgccgcgcgctcgccggcgtgcgcccctgctac
gccgtcaagtgcaacccagacccggcgctcctgggcgcgctcgccgcgctcggcgcgggc
ttcgactgcgccagccgcgccgagatcgaggccgtgctcgcgctcggcgtccggccccgc
gacatcgtctacgccaacccctgcaagcccgagccgcacctcgagtacgccgccgaggtc
ggcgtcagcctcgccacctacgactccgaggaggaggtggccaaggtcaagcgctgccac
ccgaactgcgagctcctgctccgcctcaagggccccgacggcggcgacgccagggtcgac
ctgggcaccaagtacggcgcgcacgccgacgaggtcgtgccgctcctccgcgccgcccag
tgcgcgggggtcaccgtggccggcgtctccttccacgtcggcagcggcgccaacaacctc
gccgtgtaccgcggggccatcgaggccgcgcgcgccgcgttcgacgcggcggccgccctg
gggatgccgcccatgcgcgtcctcgacgtcggcggcgggttcgtgtccggccccacgttc
gacgaggcggcggcggtcatcaacgacgcgctcgcgcagcacttcggcgacctgccgtgc
gtggaggtcatcggcgagccggggaggtacttcgccgagacggcgttcacgctcgccgcg
cgcgtcatcgggaagcgcacgcgcggcgaggtgcgcgagtactggatcgacgacggcctc
tacggctcgctcaactgcatcgtcatggaccactacgtgccgactccgaggccgctcgcc
accccgcgccccggcgagaagacctacacctcgacggtgttcgggccgacgtgcgactcc
ctcgacacggtggtgaccgggtaccagctgccggagatgagcgtgggcgactggctcgtc
ttcgacaacatgggcgcgtacaccactggggccggttccaacttcaacggcttcgccacg
tcggacataaagatctacgtggcgtactccagctga
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