KEGG   Panicum virgatum (switchgrass): 120696143
Entry
120696143         CDS       T07260                                 
Name
(RefSeq) ornithine decarboxylase-like
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00330  Arginine and proline metabolism
pvir00480  Glutathione metabolism
pvir01100  Metabolic pathways
pvir01110  Biosynthesis of secondary metabolites
pvir04148  Efferocytosis
Module
pvir_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    120696143
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    120696143
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    120696143
Enzymes [BR:pvir01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     120696143
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC AP_endonuc_2
Other DBs
NCBI-GeneID: 120696143
NCBI-ProteinID: XP_039835222
LinkDB
Position
2K:complement(54286621..54288455)
AA seq 411 aa
MVGSSPLQAMLVAPGVKDRKVLAFERRDALKDKDAASGLLRAVLASNPAQRTAFYAFDLA
RAADLYWAWRRALAGVRPCYAVKCNPDPALLGALAALGAGFDCASRAEIEAVLALGVRPR
DIVYANPCKPEPHLEYAAEVGVSLATYDSEEEVAKVKRCHPNCELLLRLKGPDGGDARVD
LGTKYGAHADEVVPLLRAAQCAGVTVAGVSFHVGSGANNLAVYRGAIEAARAAFDAAAAL
GMPPMRVLDVGGGFVSGPTFDEAAAVINDALAQHFGDLPCVEVIGEPGRYFAETAFTLAA
RVIGKRTRGEVREYWIDDGLYGSLNCIVMDHYVPTPRPLATPRPGEKTYTSTVFGPTCDS
LDTVVTGYQLPEMSVGDWLVFDNMGAYTTGAGSNFNGFATSDIKIYVAYSS
NT seq 1236 nt   +upstreamnt  +downstreamnt
atggtcgggagcagccccctgcaggccatgctggtggcccccggcgtcaaggacaggaag
gtgctcgcgttcgagcgccgcgacgcgctcaaggacaaggacgccgcctccggcctcctc
cgcgccgtcctcgcctccaacccggcccagcggaccgccttctacgccttcgacctcgcc
agggccgccgacctctactgggcgtggcgccgcgcgctcgccggcgtgcgcccctgctac
gccgtcaagtgcaacccagacccggcgctcctgggcgcgctcgccgcgctcggcgcgggc
ttcgactgcgccagccgcgccgagatcgaggccgtgctcgcgctcggcgtccggccccgc
gacatcgtctacgccaacccctgcaagcccgagccgcacctcgagtacgccgccgaggtc
ggcgtcagcctcgccacctacgactccgaggaggaggtggccaaggtcaagcgctgccac
ccgaactgcgagctcctgctccgcctcaagggccccgacggcggcgacgccagggtcgac
ctgggcaccaagtacggcgcgcacgccgacgaggtcgtgccgctcctccgcgccgcccag
tgcgcgggggtcaccgtggccggcgtctccttccacgtcggcagcggcgccaacaacctc
gccgtgtaccgcggggccatcgaggccgcgcgcgccgcgttcgacgcggcggccgccctg
gggatgccgcccatgcgcgtcctcgacgtcggcggcgggttcgtgtccggccccacgttc
gacgaggcggcggcggtcatcaacgacgcgctcgcgcagcacttcggcgacctgccgtgc
gtggaggtcatcggcgagccggggaggtacttcgccgagacggcgttcacgctcgccgcg
cgcgtcatcgggaagcgcacgcgcggcgaggtgcgcgagtactggatcgacgacggcctc
tacggctcgctcaactgcatcgtcatggaccactacgtgccgactccgaggccgctcgcc
accccgcgccccggcgagaagacctacacctcgacggtgttcgggccgacgtgcgactcc
ctcgacacggtggtgaccgggtaccagctgccggagatgagcgtgggcgactggctcgtc
ttcgacaacatgggcgcgtacaccactggggccggttccaacttcaacggcttcgccacg
tcggacataaagatctacgtggcgtactccagctga

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